RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 PROKR1Q8TCW9 393 aa22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 TRIM5Q9C035 493 aa22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 LRRC40Q9H9A6 602 aa22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 CASS4Q9NQ75 786 aa22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 SMARCAL1Q9NZC9 954 aa22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 OR6C2Q9NZP2 312 aa22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 SRPK3Q9UPE1 567 aa22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 TCP11X1B4DZS4 312 aa22.31■■□□□ 1.16
SMARCD1-209ENST00000550477 CCL22O00626 93 aa22.31■■□□□ 1.16
SMARCD1-209ENST00000550477 GAS8O95995 478 aa22.31■■□□□ 1.16
SMARCD1-209ENST00000550477 PVRP15151 417 aa22.31■■□□□ 1.16
SMARCD1-209ENST00000550477 P3H1Q32P28 736 aa22.31■■□□□ 1.16
SMARCD1-209ENST00000550477 TLDC1Q6P9B6 456 aa22.31■■□□□ 1.16
SMARCD1-209ENST00000550477 TBC1D21Q8IYX1 336 aa22.31■■□□□ 1.16
SMARCD1-209ENST00000550477 DENND1AQ8TEH3 1009 aa22.31■■□□□ 1.16
SMARCD1-209ENST00000550477 CDKN2AIPNLQ96HQ2 116 aa22.31■■□□□ 1.16
SMARCD1-209ENST00000550477 CHRNA10Q9GZZ6 450 aa22.31■■□□□ 1.16
SMARCD1-209ENST00000550477 LUZP4Q9P127 313 aa22.31■■□□□ 1.16
SMARCD1-209ENST00000550477 IFT80Q9P2H3 777 aaPredicted RBP22.31■■□□□ 1.16
SMARCD1-209ENST00000550477 USP9XQ93008 2570 aaPredicted RBP22.31■■□□□ 1.16
SMARCD1-209ENST00000550477 ITIH4Q14624 930 aa22.3■■□□□ 1.16
SMARCD1-209ENST00000550477 SYTL3Q4VX76 610 aa22.3■■□□□ 1.16
SMARCD1-209ENST00000550477 RHBDD2Q6NTF9 364 aa22.3■■□□□ 1.16
SMARCD1-209ENST00000550477 CLDN19Q8N6F1 224 aa22.3■■□□□ 1.16
SMARCD1-209ENST00000550477 RBMXL3Q8N7X1 1067 aaKnown RBP22.3■■□□□ 1.16
SMARCD1-209ENST00000550477 TC2NQ8N9U0 490 aa22.3■■□□□ 1.16
SMARCD1-209ENST00000550477 ELMO1Q92556 727 aa22.3■■□□□ 1.16
SMARCD1-209ENST00000550477 TDRKHQ9Y2W6 561 aaKnown RBP22.3■■□□□ 1.16
SMARCD1-209ENST00000550477 PTRH2Q9Y3E5 179 aaKnown RBP22.3■■□□□ 1.16
SMARCD1-209ENST00000550477 SHANK1Q9Y566 2161 aa22.3■■□□□ 1.16
SMARCD1-209ENST00000550477 CCDC78A2IDD5 438 aa22.29■■□□□ 1.16
SMARCD1-209ENST00000550477 OR56A5P0C7T3 313 aa22.29■■□□□ 1.16
SMARCD1-209ENST00000550477 UGT2B7P16662 529 aa22.29■■□□□ 1.16
SMARCD1-209ENST00000550477 CDKN1CP49918 316 aaPredicted RBP22.29■■□□□ 1.16
SMARCD1-209ENST00000550477 RAPSNQ13702 412 aa22.29■■□□□ 1.16
SMARCD1-209ENST00000550477 ELOAQ14241 798 aaKnown RBP22.29■■□□□ 1.16
SMARCD1-209ENST00000550477 EIF2S3LQ2VIR3 472 aaKnown RBP22.29■■□□□ 1.16
SMARCD1-209ENST00000550477 FAM69BQ5VUD6 431 aa22.29■■□□□ 1.16
SMARCD1-209ENST00000550477 UNC5AQ6ZN44 842 aa22.29■■□□□ 1.16
SMARCD1-209ENST00000550477 LINC00523Q86TU6 105 aa22.29■■□□□ 1.16
SMARCD1-209ENST00000550477 LURAP1LQ8IV03 231 aa22.29■■□□□ 1.16
SMARCD1-209ENST00000550477 PTERQ96BW5 349 aa22.29■■□□□ 1.16
SMARCD1-209ENST00000550477 FAM118BQ9BPY3 351 aa22.29■■□□□ 1.16
SMARCD1-209ENST00000550477 TFR2Q9UP52 801 aa22.29■■□□□ 1.16
SMARCD1-209ENST00000550477 ICKQ9UPZ9 632 aa22.29■■□□□ 1.16
SMARCD1-209ENST00000550477 B3GNT3Q9Y2A9 372 aa22.29■■□□□ 1.16
SMARCD1-209ENST00000550477 A0A0J9YY10 115 aa22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 ISM1B1AKI9 464 aa22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 ZSCAN9O15535 394 aaPredicted RBP22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 SEMA7AO75326 666 aa22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 KLF7O75840 302 aaPredicted RBP22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 CHRM5P08912 532 aaPredicted RBP22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 CBSLP0DN79 551 aa22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 TPH1P17752 444 aa22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 CBSP35520 551 aa22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 POU6F1Q14863 301 aa22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 CYP2A13Q16696 494 aa22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 ZNF658BQ4V348 819 aaPredicted RBP22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 ZNF385CQ66K41 422 aaPredicted RBP22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 MRGPREQ86SM8 312 aa22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 GALNT16Q8N428 558 aa22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 ZADH2Q8N4Q0 377 aa22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 Q8NA96 180 aa22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 OR5AR1Q8NGP9 310 aa22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 OR5K2Q8NHB8 316 aa22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 OR2A14Q96R47 310 aa22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 NDC1Q9BTX1 674 aa22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 TSSK1BQ9BXA7 367 aa22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 ILKAPQ9H0C8 392 aaPredicted RBP22.28■■□□□ 1.16
SMARCD1-209ENST00000550477 AP2A1O95782 977 aa22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 PIM1P11309 404 aaPredicted RBP22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 PPARGP37231 505 aaPredicted RBP22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 MYBPC3Q14896 1274 aa22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 KIR2DS3Q14952 304 aa22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 BRD3Q15059 726 aa22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 DBN1Q16643 649 aa22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 DCAF10Q5QP82 559 aa22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 C1orf189Q5VU69 101 aa22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 KCTD11Q693B1 232 aa22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 KLHDC8BQ8IXV7 354 aa22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 UBL4BQ8N7F7 174 aa22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 OR2Y1Q8NGV0 311 aa22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 DLG3Q92796 817 aa22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 NACC2Q96BF6 587 aa22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 SPRTNQ9H040 489 aaPredicted RBP22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 FAM60AQ9NP50 221 aa22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 ATP13A2Q9NQ11 1180 aa22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 PLCL2Q9UPR0 1127 aa22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 EPN1Q9Y6I3 576 aaPredicted RBP22.27■■□□□ 1.16
SMARCD1-209ENST00000550477 RPN2P04844 631 aa22.26■■□□□ 1.15
SMARCD1-209ENST00000550477 MSNP26038 577 aaKnown RBP22.26■■□□□ 1.15
SMARCD1-209ENST00000550477 ARSFP54793 590 aa22.26■■□□□ 1.15
SMARCD1-209ENST00000550477 MRPL49Q13405 166 aaKnown RBP22.26■■□□□ 1.15
SMARCD1-209ENST00000550477 SLC5A12Q1EHB4 618 aa22.26■■□□□ 1.15
SMARCD1-209ENST00000550477 PLEKHN1Q494U1 663 aaPredicted RBP22.26■■□□□ 1.15
SMARCD1-209ENST00000550477 PACS1Q6VY07 963 aa22.26■■□□□ 1.15
SMARCD1-209ENST00000550477 TRIM73Q86UV7 250 aa22.26■■□□□ 1.15
SMARCD1-209ENST00000550477 ZNF655Q8N720 491 aaPredicted RBP22.26■■□□□ 1.15
SMARCD1-209ENST00000550477 FAM71DQ8N9W8 422 aa22.26■■□□□ 1.15
SMARCD1-209ENST00000550477 SLC22A18Q96BI1 424 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms