RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ASB8Q9H765 288 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 PDE7BQ9NP56 450 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 SAYSD1Q9NPB0 183 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 CHRAC1Q9NRG0 131 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 TREX1Q9NSU2 369 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 SMOXQ9NWM0 555 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 EPHA6Q9UF33 1036 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 CRLS1Q9UJA2 301 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 TP53TG5Q9Y2B4 290 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 KCTD3Q9Y597 815 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 OR5K3A6NET4 321 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 H7C0S8 307 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 SRP72O76094 671 aaKnown RBP13.06□□□□□ -0.32
NUP188-211ENST00000550219 USP1O94782 785 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 TTC4O95801 387 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 FOLR1P15328 257 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 PGAM1P18669 254 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 FRG1Q14331 258 aaKnown RBP13.06□□□□□ -0.32
NUP188-211ENST00000550219 SLMAPQ14BN4 828 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.06□□□□□ -0.32
NUP188-211ENST00000550219 ANKRD20A4Q4UJ75 823 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 ARMC6Q6NXE6 501 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 OOSP2Q86WS3 158 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 GSPT2Q8IYD1 628 aaKnown RBP13.06□□□□□ -0.32
NUP188-211ENST00000550219 ZBED8Q8IZ13 594 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 FBXO36Q8NEA4 188 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
NUP188-211ENST00000550219 OR13J1Q8NGT2 312 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 DTX3LQ8TDB6 740 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 AENQ8WTP8 325 aaKnown RBP13.06□□□□□ -0.32
NUP188-211ENST00000550219 RUFY1Q96T51 708 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 INSM2Q96T92 566 aaPredicted RBP13.06□□□□□ -0.32
NUP188-211ENST00000550219 TWSG1Q9GZX9 223 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 RAB33BQ9H082 229 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 NLE1Q9NVX2 485 aaPredicted RBP13.06□□□□□ -0.32
NUP188-211ENST00000550219 SOHLH2Q9NX45 425 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 SAMD15Q9P1V8 674 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 SLC2A6Q9UGQ3 507 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 ANAPC2Q9UJX6 822 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 KCND3Q9UK17 655 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 POLHQ9Y253 713 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 KCNMB2Q9Y691 235 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 MAD1L1Q9Y6D9 718 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 SETXQ7Z333 2677 aaKnown RBP13.06□□□□□ -0.32
NUP188-211ENST00000550219 MYO18BQ8IUG5 2567 aa13.06□□□□□ -0.32
NUP188-211ENST00000550219 ZCWPW2A0A1B0GU75 182 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 PIPSLA2A3N6 862 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 OR6C74A6NCV1 312 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 TLCD2A6NGC4 264 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 CYSRT1A8MQ03 144 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 CCL22O00626 93 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 MT-ND3P03897 115 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 NTRK1P04629 796 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 POLBP06746 335 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 NMBRP28336 390 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 HADHAP40939 763 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 CASRP41180 1078 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 RPS18P62269 152 aaKnown RBP13.05□□□□□ -0.32
NUP188-211ENST00000550219 ACY1Q03154 408 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 KRT33BQ14525 404 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 IGFBP7Q16270 282 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 CRTC2Q53ET0 693 aaPredicted RBP13.05□□□□□ -0.32
NUP188-211ENST00000550219 HP1BP3Q5SSJ5 553 aaPredicted RBP13.05□□□□□ -0.32
NUP188-211ENST00000550219 PWWP2BQ6NUJ5 590 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 CASC4Q6P4E1 433 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 FBXO38Q6PIJ6 1188 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 MICALCLQ6ZW33 695 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 CYS1Q717R9 158 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 CCDC25Q86WR0 208 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 ANKMY2Q8IV38 441 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 LILRA3Q8N6C8 439 aaPredicted RBP13.05□□□□□ -0.32
NUP188-211ENST00000550219 OR13C4Q8NGS5 318 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 PYROXD1Q8WU10 500 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 MFSD3Q96ES6 412 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 DCUN1D1Q96GG9 259 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 CDKN2AIPNLQ96HQ2 116 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 SGSM3Q96HU1 749 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 SLC41A2Q96JW4 573 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 ZNF514Q96K75 400 aaPredicted RBP13.05□□□□□ -0.32
NUP188-211ENST00000550219 DNAJC1Q96KC8 554 aaKnown RBP13.05□□□□□ -0.32
NUP188-211ENST00000550219 RMDN2Q96LZ7 410 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 TRIM56Q9BRZ2 755 aaKnown RBP13.05□□□□□ -0.32
NUP188-211ENST00000550219 ACTL8Q9H568 366 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 FAM96AQ9H5X1 160 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 LHX9Q9NQ69 397 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 FGF21Q9NSA1 209 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 HRASLS2Q9NWW9 162 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 ZC3H7BQ9UGR2 993 aaKnown RBP13.05□□□□□ -0.32
NUP188-211ENST00000550219 PADI1Q9ULC6 663 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 CHMP2BQ9UQN3 213 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 MAN2B2Q9Y2E5 1009 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 DNMT3AQ9Y6K1 912 aaPredicted RBP13.05□□□□□ -0.32
NUP188-211ENST00000550219 FAM169AQ9Y6X4 670 aa13.05□□□□□ -0.32
NUP188-211ENST00000550219 BOD1L1Q8NFC6 3051 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 MGAT4DA6NG13 374 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 MKRN2OSH3BPM6 223 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 CREG1O75629 220 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 RFPL1O75677 317 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 GSTA2P09210 222 aa13.04□□□□□ -0.32
NUP188-211ENST00000550219 RALBP11234 206 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms