RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 PKP3Q9Y446 797 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 CPQQ9Y646 472 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 INSIG1O15503 277 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 GMNNO75496 209 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 RASAL1O95294 804 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 IL12AP29459 219 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 RELAQ04206 551 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 PSRC1Q6PGN9 363 aaPredicted RBP10.87□□□□□ -0.67
LINC00661-204ENST00000549354 MRPL43Q8N983 215 aaKnown RBP10.87□□□□□ -0.67
LINC00661-204ENST00000549354 KREMEN2Q8NCW0 462 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 OR2T11Q8NH01 316 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 BADQ92934 168 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 ROPN1LQ96C74 230 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 NSMCE2Q96MF7 247 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 FEM1AQ9BSK4 669 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 CINPQ9BW66 212 aaPredicted RBP10.87□□□□□ -0.67
LINC00661-204ENST00000549354 TNKS2Q9H2K2 1166 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 CXXC1Q9P0U4 656 aaPredicted RBP10.87□□□□□ -0.67
LINC00661-204ENST00000549354 TRMT6Q9UJA5 497 aaKnown RBP10.87□□□□□ -0.67
LINC00661-204ENST00000549354 MTCL1Q9Y4B5 1905 aaKnown RBP10.87□□□□□ -0.67
LINC00661-204ENST00000549354 CFAP99D6REC4 459 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 DFNA5O60443 496 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 SLC22A3O75751 556 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 PRLP01236 227 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 ZNF37AP17032 561 aaPredicted RBP10.87□□□□□ -0.67
LINC00661-204ENST00000549354 GABRR2P28476 465 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 TGFBR1P36897 503 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 LBX1P52954 281 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 TRIM16LQ309B1 348 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 BLOC1S3Q6QNY0 202 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 ENPP6Q6UWR7 440 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 CACUL1Q86Y37 369 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 HS6ST3Q8IZP7 471 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 ZBTB8BQ8NAP8 495 aaPredicted RBP10.87□□□□□ -0.67
LINC00661-204ENST00000549354 MRPS31Q92665 395 aaKnown RBP10.87□□□□□ -0.67
LINC00661-204ENST00000549354 BORCS5Q969J3 196 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 UHRF1Q96T88 793 aaPredicted RBP10.87□□□□□ -0.67
LINC00661-204ENST00000549354 CSF3RQ99062 836 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 RHNO1Q9BSD3 238 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 EMILIN2Q9BXX0 1053 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 ROGDIQ9GZN7 287 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 AQP12BA6NM10 295 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 TBL1XO60907 577 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 WISP3O95389 354 aaPredicted RBP10.86□□□□□ -0.67
LINC00661-204ENST00000549354 LRG1P02750 347 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 C8AP07357 584 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 MTHFRP42898 656 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 ERVFC1P60507 584 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 CYP4F2P78329 520 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 CYP4F3Q08477 520 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 ZNF829Q3KNS6 432 aaPredicted RBP10.86□□□□□ -0.67
LINC00661-204ENST00000549354 RFTN2Q52LD8 501 aaPredicted RBP10.86□□□□□ -0.67
LINC00661-204ENST00000549354 PTRHD1Q6GMV3 140 aaKnown RBP10.86□□□□□ -0.67
LINC00661-204ENST00000549354 CROCCP3Q8IVE0 287 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 AQP12AQ8IXF9 295 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 LHX3Q9UBR4 397 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 DAPK2Q9UIK4 370 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 ZNF451Q9Y4E5 1061 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 ATG2BQ96BY7 2078 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 HELZP42694 1942 aaKnown RBP10.86□□□□□ -0.67
LINC00661-204ENST00000549354 C5orf67F2Z3F1 127 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 NRG2O14511 850 aaPredicted RBP10.86□□□□□ -0.67
LINC00661-204ENST00000549354 ADAM23O75077 832 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 HRH2P25021 359 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 PIGAP37287 484 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 PSMD8P48556 350 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 ACADVLP49748 655 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 POLR2JP52435 117 aaKnown RBP10.86□□□□□ -0.67
LINC00661-204ENST00000549354 UBE3AQ05086 875 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 SPCS2Q15005 226 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 GPSM1Q86YR5 675 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 DTWD1Q8N5C7 304 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 ITFG1Q8TB96 612 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 FRS2Q8WU20 508 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 UBE2FQ969M7 185 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 FAM162AQ96A26 154 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 ULK4Q96C45 1275 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 LMLNQ96KR4 655 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 TOR3AQ9H497 397 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 SDR39U1Q9NRG7 319 aaPredicted RBP10.86□□□□□ -0.67
LINC00661-204ENST00000549354 TAS2R13Q9NYV9 303 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 PCDHA9Q9Y5H5 950 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 H0YJX3 145 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 MITFO75030 526 aaPredicted RBP10.86□□□□□ -0.67
LINC00661-204ENST00000549354 SEC22BO75396 215 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 INMTO95050 263 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 FGF19O95750 216 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 CHEK2O96017 543 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 FTH1P02794 183 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 OPRL1P41146 370 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 CLCN4P51793 760 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 HSPA14Q0VDF9 509 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 FAM174BQ3ZCQ3 159 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 INTS11Q5TA45 600 aaKnown RBP10.86□□□□□ -0.67
LINC00661-204ENST00000549354 NCEH1Q6PIU2 408 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 MFSD2AQ8NA29 543 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 DCAF4L2Q8NA75 395 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 LZICQ8WZA0 190 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 FOXJ1Q92949 421 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 EBPLQ9BY08 206 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms