RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 ITPAQ9BY32 194 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 GABARAPL1Q9H0R8 117 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.92□□□□□ -0.18
SRP54-202ENST00000546080 A0A1W2PQH9 124 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 PABPN1LA6NDY0 278 aaKnown RBP13.92□□□□□ -0.18
SRP54-202ENST00000546080 AREL1O15033 823 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 PARNO95453 639 aaKnown RBP13.92□□□□□ -0.18
SRP54-202ENST00000546080 PKMP14618 531 aaKnown RBP13.92□□□□□ -0.18
SRP54-202ENST00000546080 IL1RNP18510 177 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 UGT2B10P36537 528 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 PBX3P40426 434 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 DAPP51397 102 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 CRYBB1P53674 252 aaPredicted RBP13.92□□□□□ -0.18
SRP54-202ENST00000546080 DMPKQ09013 629 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 GBX1Q14549 363 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 GTDC1Q4AE62 458 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 RSBN1Q5VWQ0 802 aaPredicted RBP13.92□□□□□ -0.18
SRP54-202ENST00000546080 TTC29Q8NA56 475 aaPredicted RBP13.92□□□□□ -0.18
SRP54-202ENST00000546080 OR4K2Q8NGD2 314 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 OR10Q1Q8NGQ4 319 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 POP5Q969H6 163 aaKnown RBP13.92□□□□□ -0.18
SRP54-202ENST00000546080 SLC38A4Q969I6 547 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 PYCR2Q96C36 320 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 BARD1Q99728 777 aaKnown RBP13.92□□□□□ -0.18
SRP54-202ENST00000546080 PAAF1Q9BRP4 392 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 NMUR1Q9HB89 426 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 NUDT4Q9NZJ9 180 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 COMMD10Q9Y6G5 202 aa13.92□□□□□ -0.18
SRP54-202ENST00000546080 TREHO43280 583 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 AIREO43918 545 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 RAMP2O60895 175 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 EPOP01588 193 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 IL6P05231 212 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 KRT8P05787 483 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 PGRP06401 933 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 MAGP20916 626 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 GTF2E2P29084 291 aaKnown RBP13.91□□□□□ -0.18
SRP54-202ENST00000546080 CACNB2Q08289 660 aaPredicted RBP13.91□□□□□ -0.18
SRP54-202ENST00000546080 MAD2L1BPQ15013 274 aaPredicted RBP13.91□□□□□ -0.18
SRP54-202ENST00000546080 PAN2Q504Q3 1202 aaKnown RBP13.91□□□□□ -0.18
SRP54-202ENST00000546080 MS4A13Q5J8X5 152 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.91□□□□□ -0.18
SRP54-202ENST00000546080 ATG9BQ674R7 924 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 PNCKQ6P2M8 343 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 RNF19BQ6ZMZ0 732 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 AHSA2Q719I0 299 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 ZNF683Q8IZ20 524 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 GLB1L3Q8NCI6 653 aaPredicted RBP13.91□□□□□ -0.18
SRP54-202ENST00000546080 LILRB4Q8NHJ6 448 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 IPCEF1Q8WWN9 437 aaPredicted RBP13.91□□□□□ -0.18
SRP54-202ENST00000546080 CLSTN3Q9BQT9 956 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 NACA2Q9H009 215 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 SARS2Q9NP81 518 aaKnown RBP13.91□□□□□ -0.18
SRP54-202ENST00000546080 C1orf109Q9NX04 203 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 MIOSQ9NXC5 875 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 IL37Q9NZH6 218 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 GBF1Q92538 1859 aa13.91□□□□□ -0.18
SRP54-202ENST00000546080 ANKRD34BA5PLL1 514 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 MYO1GB0I1T2 1018 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 ARVCFO00192 962 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 OR7A17O14581 309 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 MUSKO15146 869 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 RGS14O43566 566 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 NDUFB5O43674 189 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 KRT20P35900 424 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 PPP3CCP48454 512 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 CDKN1CP49918 316 aaPredicted RBP13.9□□□□□ -0.18
SRP54-202ENST00000546080 NEK2P51955 445 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 ZNF140P52738 457 aaPredicted RBP13.9□□□□□ -0.18
SRP54-202ENST00000546080 MAD2L1Q13257 205 aaPredicted RBP13.9□□□□□ -0.18
SRP54-202ENST00000546080 KRR1Q13601 381 aaKnown RBP13.9□□□□□ -0.18
SRP54-202ENST00000546080 GTF2H2Q13888 395 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 SYT16Q17RD7 645 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 C18orf21Q32NC0 220 aaPredicted RBP13.9□□□□□ -0.18
SRP54-202ENST00000546080 CARD16Q5EG05 197 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 TPRG1LQ5T0D9 272 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 SLX4IPQ5VYV7 408 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 KDM4DQ6B0I6 523 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 GTF2H2CQ6P1K8 395 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 CEP68Q76N32 757 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 TAS2R42Q7RTR8 314 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 GALNT13Q8IUC8 556 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 SYTL1Q8IYJ3 562 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 LIX1Q8N485 282 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 CD200R1Q8TD46 325 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 ATL1Q8WXF7 558 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 MIR1-1HGQ9H1L0 117 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 RASSF1Q9NS23 344 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 KIF17Q9P2E2 1029 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 VPS9D1Q9Y2B5 631 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 TLR6Q9Y2C9 796 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 TNPO3Q9Y5L0 923 aaKnown RBP13.9□□□□□ -0.18
SRP54-202ENST00000546080 MN1Q10571 1320 aaPredicted RBP13.9□□□□□ -0.18
SRP54-202ENST00000546080 A6NL46 340 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 E5RI56 91 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 IDH3BO43837 385 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 CCNKO75909 580 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 OTCP00480 354 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 F2P00734 622 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 SERPINF2P08697 491 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms