RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 KCNJ5P48544 419 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 WDR5P61964 334 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 NAB1Q13506 487 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 IHHQ14623 411 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 PLCL1Q15111 1095 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 CYP27C1Q4G0S4 372 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 SPANXN3Q5MJ09 141 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 CERCAMQ5T4B2 595 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 RAP1GAP2Q684P5 730 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 CES3Q6UWW8 571 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 PIWIL3Q7Z3Z3 882 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 RGL4Q8IZJ4 473 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 CARFQ8N187 725 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 NAT16Q8N8M0 369 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 TDRD5Q8NAT2 981 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 ZNF420Q8TAQ5 688 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 HMCESQ96FZ2 354 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 MYRFLQ96LU7 910 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 BCL2L14Q9BZR8 327 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 TRIM45Q9H8W5 580 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 GIMAP4Q9NUV9 329 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 UBP1Q9NZI7 540 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 CNOT11Q9UKZ1 510 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 DTX4Q9Y2E6 619 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 TRAF6Q9Y4K3 522 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 PLXNA4Q9HCM2 1894 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 TEX51A0A1B0GUA7 166 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 ZNF840PA6NDX5 716 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 SEMA3DO95025 777 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 MT-CYBP00156 380 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 TIMP1P01033 207 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 SLC6A4P31645 630 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 HTR2BP41595 481 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 NPY2RP49146 381 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 HARS2P49590 506 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 KCNQ1P51787 676 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 RAB14P61106 215 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 ERVK-21P61565 698 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 PHC1P78364 1004 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 GTF2IRD2BQ6EKJ0 949 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 TIGD7Q6NT04 549 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 LAYNQ6UX15 382 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 CHSY3Q70JA7 882 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 TFAP2DQ7Z6R9 452 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 GTF2IRD2Q86UP8 949 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 CIR1Q86X95 450 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 ADGRG2Q8IZP9 1017 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 PGAM4Q8N0Y7 254 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 ZNF461Q8TAF7 563 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 TADA1Q96BN2 335 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 C17orf62Q9BQA9 187 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 APOL2Q9BQE5 337 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 MROQ9BYG7 248 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 OSGEPL1Q9H4B0 414 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 EFCAB1Q9HAE3 211 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 TIGARQ9NQ88 270 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 DUS2Q9NX74 493 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 TMEM216Q9P0N5 145 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 TXNDC16Q9P2K2 825 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 IPO11Q9UI26 975 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 CHD5Q8TDI0 1954 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 BPTFQ12830 3046 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 CCDC85CA6NKD9 419 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 C16orf96A6NNT2 1141 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 J3KR12 359 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 ACOT8O14734 319 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 KIAA0355O15063 1070 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 SLC22A1O15245 554 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 GATCO43716 136 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 GJB5O95377 273 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 HMBSP08397 361 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 F7P08709 466 aaPredicted RBP7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 CSF2RAP15509 400 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 TRHRP34981 398 aaPredicted RBP7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 SERPINB9P50453 376 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 PRKCQQ04759 706 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 INAVAQ3KP66 663 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 NHSL2Q5HYW2 709 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 LRRC8EQ6NSJ5 796 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 EPGNQ6UW88 154 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 MACC1Q6ZN28 852 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 CMTR2Q8IYT2 770 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 TEX26Q8N6G2 289 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 ST13P5Q8NFI4 369 aaPredicted RBP7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 FAM110BQ8TC76 370 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 TFAP2CQ92754 450 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 COL26A1Q96A83 441 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 CERS2Q96G23 380 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 TRMT2BQ96GJ1 504 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 MRGPRX2Q96LB1 330 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 ZNF558Q96NG5 402 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 NTMT1Q9BV86 223 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 KIFC1Q9BW19 673 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 SOX17Q9H6I2 414 aaPredicted RBP7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 C11orf49Q9H6J7 331 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 ERVMER34-1Q9H9K5 563 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 MAGED2Q9UNF1 606 aaPredicted RBP7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 MRPS7Q9Y2R9 242 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 OBSL1O75147 1896 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 FAM221BA6H8Z2 402 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 495 ms