RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 HTR1EP28566 365 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 ARL1P40616 181 aaPredicted RBP13.46□□□□□ -0.25
RTN3-210ENST00000540798 CREB5Q02930 508 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 LIPEQ05469 1076 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 SERPINA13PQ6UXR4 307 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 DNAJB14Q8TBM8 379 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 TIFAQ96CG3 184 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 ZSCAN5AQ9BUG6 496 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 Q9H521 79 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 ZNF490Q9ULM2 529 aaPredicted RBP13.46□□□□□ -0.25
RTN3-210ENST00000540798 AP4B1Q9Y6B7 739 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 ATP6V1G1O75348 118 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 ULK1O75385 1050 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 SLCO2B1O94956 709 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 RB1P06400 928 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 MMP12P39900 470 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 NNMTP40261 264 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 ETV3P41162 512 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 CHN2P52757 468 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 Q6ZVL8 140 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 DET1Q7L5Y6 550 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 ADGRG5Q8IZF4 528 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 L3MBTL4Q8NA19 623 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 PAPD5Q8NDF8 572 aaKnown RBP13.46□□□□□ -0.25
RTN3-210ENST00000540798 OSCP1Q8WVF1 389 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 RSPRY1Q96DX4 576 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 TSC22D3Q99576 134 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 UBAP1Q9NZ09 502 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 KLQ9UEF7 1012 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 SNX13Q9Y5W8 968 aa13.46□□□□□ -0.25
RTN3-210ENST00000540798 ZCCHC18P0CG32 403 aa13.46□□□□□ -0.26
RTN3-210ENST00000540798 NFKBIAP25963 317 aa13.46□□□□□ -0.26
RTN3-210ENST00000540798 AP1S2P56377 157 aa13.46□□□□□ -0.26
RTN3-210ENST00000540798 MTX3Q5HYI7 312 aa13.46□□□□□ -0.26
RTN3-210ENST00000540798 SPPL2CQ8IUH8 684 aa13.46□□□□□ -0.26
RTN3-210ENST00000540798 RAVER1Q8IY67 606 aaKnown RBP13.46□□□□□ -0.26
RTN3-210ENST00000540798 RGL4Q8IZJ4 473 aa13.46□□□□□ -0.26
RTN3-210ENST00000540798 ITFG1Q8TB96 612 aa13.46□□□□□ -0.26
RTN3-210ENST00000540798 FAM110BQ8TC76 370 aa13.46□□□□□ -0.26
RTN3-210ENST00000540798 ING5Q8WYH8 240 aa13.46□□□□□ -0.26
RTN3-210ENST00000540798 TRIM8Q9BZR9 551 aa13.46□□□□□ -0.26
RTN3-210ENST00000540798 EGFL7Q9UHF1 273 aa13.46□□□□□ -0.26
RTN3-210ENST00000540798 EIF3LQ9Y262 564 aaKnown RBP13.46□□□□□ -0.26
RTN3-210ENST00000540798 ZFC3H1O60293 1989 aaKnown RBP13.45□□□□□ -0.26
RTN3-210ENST00000540798 C2orf16Q68DN1 1984 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 DHRS12A0PJE2 317 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 C16orf96A6NNT2 1141 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 FFAR3O14843 346 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 GPR42O15529 346 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 HNRNPRO43390 633 aaKnown RBP13.45□□□□□ -0.26
RTN3-210ENST00000540798 GPIP06744 558 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 FESP07332 822 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 ADH5P11766 374 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 SLC2A4P14672 509 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 GNPDA1P46926 289 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 DGKGP49619 791 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 RPL38P63173 70 aaKnown RBP13.45□□□□□ -0.26
RTN3-210ENST00000540798 HSPA14Q0VDF9 509 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 PWP1Q13610 501 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 BOP1Q14137 746 aaKnown RBP13.45□□□□□ -0.26
RTN3-210ENST00000540798 INPP5AQ14642 412 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 CBX2Q14781 532 aaPredicted RBP13.45□□□□□ -0.26
RTN3-210ENST00000540798 AAK1Q2M2I8 961 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 FOXB2Q5VYV0 432 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 ARHGAP22Q7Z5H3 698 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 C12orf40Q86WS4 652 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 ETFBKMTQ8IXQ9 262 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 KLHDC8AQ8IYD2 350 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 GLB1L3Q8NCI6 653 aaPredicted RBP13.45□□□□□ -0.26
RTN3-210ENST00000540798 KCTD14Q9BQ13 255 aaPredicted RBP13.45□□□□□ -0.26
RTN3-210ENST00000540798 RIOK2Q9BVS4 552 aaKnown RBP13.45□□□□□ -0.26
RTN3-210ENST00000540798 COQ10BQ9H8M1 238 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 AGPAT4Q9NRZ5 378 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 CFAP99D6REC4 459 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 AKT1P31749 480 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 USP39Q53GS9 565 aaKnown RBP13.45□□□□□ -0.26
RTN3-210ENST00000540798 TCEAL5Q5H9L2 206 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 BTN2A2Q8WVV5 523 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 EME1Q96AY2 570 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 TMEM74Q96NL1 305 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 P2RY13Q9BPV8 354 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 TRIM4Q9C037 500 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 SEMA6AQ9H2E6 1030 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 MTG2Q9H4K7 406 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 OCEL1Q9H607 264 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 LRTM1Q9HBL6 345 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 PRKAG2Q9UGJ0 569 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 SLC8A2Q9UPR5 921 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 CHD9Q3L8U1 2897 aa13.45□□□□□ -0.26
RTN3-210ENST00000540798 C7orf72A4D263 438 aa13.44□□□□□ -0.26
RTN3-210ENST00000540798 QSOX1O00391 747 aa13.44□□□□□ -0.26
RTN3-210ENST00000540798 FTH1P02794 183 aa13.44□□□□□ -0.26
RTN3-210ENST00000540798 HMGCS1Q01581 520 aa13.44□□□□□ -0.26
RTN3-210ENST00000540798 ZNF658BQ4V348 819 aaPredicted RBP13.44□□□□□ -0.26
RTN3-210ENST00000540798 ZNF697Q5TEC3 545 aa13.44□□□□□ -0.26
RTN3-210ENST00000540798 PDE12Q6L8Q7 609 aaKnown RBP13.44□□□□□ -0.26
RTN3-210ENST00000540798 NEK5Q6P3R8 708 aa13.44□□□□□ -0.26
RTN3-210ENST00000540798 NRSN1Q8IZ57 195 aa13.44□□□□□ -0.26
RTN3-210ENST00000540798 OR8J3Q8NGG0 315 aa13.44□□□□□ -0.26
RTN3-210ENST00000540798 FAM81AQ8TBF8 368 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms