RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 RALBP11234 206 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 CD68P34810 354 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 PRLHRP49683 370 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 KCNK10P57789 538 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 PTPRCAPQ14761 206 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 PRKD1Q15139 912 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 TESK1Q15569 626 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 SLC1A5Q15758 541 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 STX1AQ16623 288 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 DEFB110Q30KQ9 67 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 ALKBH5Q6P6C2 394 aaKnown RBP11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 KIRREL2Q6UWL6 708 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 ISLR2Q6UXK2 745 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 OVCH1Q7RTY7 1134 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 OR1N1Q8NGS0 311 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 SYN2Q92777 582 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 MRGPRX2Q96LB1 330 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 OR2A14Q96R47 310 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 TRIM56Q9BRZ2 755 aaKnown RBP11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 NDC1Q9BTX1 674 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 TRIM8Q9BZR9 551 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 OR52A5Q9H2C5 316 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 CTTNBP2NLQ9P2B4 639 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 UVRAGQ9P2Y5 699 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 LCMT1Q9UIC8 334 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 PKDREJQ9NTG1 2253 aa11.2□□□□□ -0.62
CLSTN3-209ENST00000539982 MTORP42345 2549 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 AGAP14A8MT82 685 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 CCL21O00585 134 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 SRP72O76094 671 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 ONECUT2O95948 504 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 ALBP02768 609 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 SERPING1P05155 500 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 PIM1P11309 404 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 UGT2B7P16662 529 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 NFKB1P19838 968 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 ALAS2P22557 587 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 TDGF1P3P51864 188 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 PRKG2Q13237 762 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 MFAP5Q13361 173 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 BOP1Q14137 746 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 SLC5A12Q1EHB4 618 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 FIGNQ5HY92 759 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 MTFR2Q6P444 385 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 ZNF449Q6P9G9 518 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 SPNS3Q6ZMD2 512 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 UNC5AQ6ZN44 842 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 LINC00696Q6ZRV3 163 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 TRIM73Q86UV7 250 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 ZNF295-AS1Q8N0V1 137 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 DNAJC22Q8N4W6 341 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 HEXDCQ8WVB3 486 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 CPLX3Q8WVH0 158 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 NR4A3Q92570 626 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 TFGQ92734 400 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 FKBP10Q96AY3 582 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 CCDC120Q96HB5 630 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 THOC3Q96J01 351 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 VPS50Q96JG6 964 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 FCRL5Q96RD9 977 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 WDR54Q9H977 334 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 COG4Q9H9E3 785 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 MRM3Q9HC36 420 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 IRAK4Q9NWZ3 460 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 PLCL2Q9UPR0 1127 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 HS3ST3B1Q9Y662 390 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 NUP210LQ5VU65 1888 aa11.19□□□□□ -0.62
CLSTN3-209ENST00000539982 TRGV8A0A0C4DH27 118 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 C2orf81A6NN90 581 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 KLHL18O94889 574 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 ATP1B2P14415 290 aaPredicted RBP11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 CAPN3P20807 821 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 PDHA2P29803 388 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 SHMT2P34897 504 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 ARSFP54793 590 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 Q0VFX4 171 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 WASHC5Q12768 1159 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 RPA4Q13156 261 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 NKG7Q16617 165 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 TUBB8Q3ZCM7 444 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 ZNF658BQ4V348 819 aaPredicted RBP11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 TMEM207Q6UWW9 146 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 GFRALQ6UXV0 394 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 RPTNQ6XPR3 784 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 BZW1Q7L1Q6 419 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 RFX6Q8HWS3 928 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 IPMKQ8NFU5 416 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 OR4K2Q8NGD2 314 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 DENND1AQ8TEH3 1009 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 DLG3Q92796 817 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 OXNAD1Q96HP4 312 aaPredicted RBP11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 MAGEB10Q96LZ2 347 aaPredicted RBP11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 NAP1L5Q96NT1 182 aaPredicted RBP11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 TAAR6Q96RI8 345 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 HGH1Q9BTY7 390 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 SLC26A1Q9H2B4 701 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 ICKQ9UPZ9 632 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 ARL5AQ9Y689 179 aa11.18□□□□□ -0.62
CLSTN3-209ENST00000539982 A0A0J9YY10 115 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 A0A1B0GTH6 734 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms