RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 KCNC1P48547 511 aa23.6■■□□□ 1.37
HMGA2-208ENST00000537429 MAZP56270 477 aaKnown RBP23.6■■□□□ 1.37
HMGA2-208ENST00000537429 BIRC2Q13490 618 aa23.6■■□□□ 1.37
HMGA2-208ENST00000537429 PHKG1Q16816 387 aa23.6■■□□□ 1.37
HMGA2-208ENST00000537429 TECRLQ5HYJ1 363 aa23.6■■□□□ 1.37
HMGA2-208ENST00000537429 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.6■■□□□ 1.37
HMGA2-208ENST00000537429 DCUN1D3Q8IWE4 304 aa23.6■■□□□ 1.37
HMGA2-208ENST00000537429 TRIM48Q8IWZ4 208 aa23.6■■□□□ 1.37
HMGA2-208ENST00000537429 KYQ8NBH2 561 aa23.6■■□□□ 1.37
HMGA2-208ENST00000537429 MAGEC3Q8TD91 643 aa23.6■■□□□ 1.37
HMGA2-208ENST00000537429 SETD7Q8WTS6 366 aaKnown RBP23.6■■□□□ 1.37
HMGA2-208ENST00000537429 SLC40A1Q9NP59 571 aa23.6■■□□□ 1.37
HMGA2-208ENST00000537429 SIGLEC6O43699 453 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 ENO2P09104 434 aaPredicted RBP23.59■■□□□ 1.37
HMGA2-208ENST00000537429 CD59P13987 128 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 CYP2A7P20853 494 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 GRK6P43250 576 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 BDKRB1P46663 353 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 KPNA2P52292 529 aaKnown RBP23.59■■□□□ 1.37
HMGA2-208ENST00000537429 HHEXQ03014 270 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 PRKG2Q13237 762 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 CCSMST1Q4G0I0 132 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 TMEM151AQ8N4L1 468 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 AVL9Q8NBF6 648 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 MCOLN3Q8TDD5 553 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 ZFPM2Q8WW38 1151 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 APOLD1Q96LR9 279 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 ATOH8Q96SQ7 321 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 RDH14Q9HBH5 336 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 POLG2Q9UHN1 485 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 BTBD3Q9Y2F9 522 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 OARD1Q9Y530 152 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 HMGB1P1B2RPK0 211 aaPredicted RBP23.59■■□□□ 1.37
HMGA2-208ENST00000537429 FLRT2O43155 660 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 KERAO60938 352 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 RBP1P09455 135 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 MAP4P27816 1152 aaKnown RBP23.59■■□□□ 1.37
HMGA2-208ENST00000537429 RPIAP49247 311 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 GRB7Q14451 532 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.59■■□□□ 1.37
HMGA2-208ENST00000537429 N4BP2L1Q5TBK1 243 aaPredicted RBP23.59■■□□□ 1.37
HMGA2-208ENST00000537429 C16orf46Q6P387 395 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 TTC23LQ6PF05 361 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 RAD51AP1Q96B01 352 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 CAMK1GQ96NX5 476 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 MRPL57Q9BQC6 102 aaKnown RBP23.59■■□□□ 1.37
HMGA2-208ENST00000537429 HGH1Q9BTY7 390 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 KIR3DX1Q9H7L2 352 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 XPR1Q9UBH6 696 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 EMCNQ9ULC0 261 aa23.59■■□□□ 1.37
HMGA2-208ENST00000537429 PPM1DO15297 605 aa23.58■■□□□ 1.36
HMGA2-208ENST00000537429 TPBGLP0DKB5 382 aa23.58■■□□□ 1.36
HMGA2-208ENST00000537429 TGFBIQ15582 683 aa23.58■■□□□ 1.36
HMGA2-208ENST00000537429 STPG1Q5TH74 334 aa23.58■■□□□ 1.36
HMGA2-208ENST00000537429 GPSM1Q86YR5 675 aa23.58■■□□□ 1.36
HMGA2-208ENST00000537429 RBM12BQ8IXT5 1001 aaKnown RBP23.58■■□□□ 1.36
HMGA2-208ENST00000537429 SCYL1Q96KG9 808 aa23.58■■□□□ 1.36
HMGA2-208ENST00000537429 TRIM54Q9BYV2 358 aa23.58■■□□□ 1.36
HMGA2-208ENST00000537429 MRPL46Q9H2W6 279 aaKnown RBP23.58■■□□□ 1.36
HMGA2-208ENST00000537429 RNF112Q9ULX5 631 aa23.58■■□□□ 1.36
HMGA2-208ENST00000537429 TDRKHQ9Y2W6 561 aaKnown RBP23.58■■□□□ 1.36
HMGA2-208ENST00000537429 PLLPQ9Y342 182 aa23.58■■□□□ 1.36
HMGA2-208ENST00000537429 RIF1Q5UIP0 2472 aaKnown RBP23.58■■□□□ 1.36
HMGA2-208ENST00000537429 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.57■■□□□ 1.36
HMGA2-208ENST00000537429 KRT87PA6NCN2 255 aa23.57■■□□□ 1.36
HMGA2-208ENST00000537429 TARM1B6A8C7 271 aa23.57■■□□□ 1.36
HMGA2-208ENST00000537429 TK2O00142 265 aa23.57■■□□□ 1.36
HMGA2-208ENST00000537429 MYO1CO00159 1063 aa23.57■■□□□ 1.36
HMGA2-208ENST00000537429 PRPF4O43172 522 aaKnown RBP eCLIP23.57■■□□□ 1.36
HMGA2-208ENST00000537429 HIST1H2AGP0C0S8 130 aaPredicted RBP23.57■■□□□ 1.36
HMGA2-208ENST00000537429 SBK3P0C264 359 aa23.57■■□□□ 1.36
HMGA2-208ENST00000537429 HIST1H2ADP20671 130 aa23.57■■□□□ 1.36
HMGA2-208ENST00000537429 OR9A1PQ8NGU1 263 aa23.57■■□□□ 1.36
HMGA2-208ENST00000537429 TCP10LQ8TDR4 215 aa23.57■■□□□ 1.36
HMGA2-208ENST00000537429 RHBDD1Q8TEB9 315 aa23.57■■□□□ 1.36
HMGA2-208ENST00000537429 HIST1H2AHQ96KK5 128 aa23.57■■□□□ 1.36
HMGA2-208ENST00000537429 HIST1H2AJQ99878 128 aa23.57■■□□□ 1.36
HMGA2-208ENST00000537429 H2AFJQ9BTM1 129 aa23.57■■□□□ 1.36
HMGA2-208ENST00000537429 C12orf65Q9H3J6 166 aaKnown RBP23.57■■□□□ 1.36
HMGA2-208ENST00000537429 STN1Q9H668 368 aaKnown RBP23.57■■□□□ 1.36
HMGA2-208ENST00000537429 UTP6Q9NYH9 597 aaKnown RBP23.57■■□□□ 1.36
HMGA2-208ENST00000537429 LY6G6EA0A0G2JKS1 128 aa23.56■■□□□ 1.36
HMGA2-208ENST00000537429 MTHFD2P13995 350 aa23.56■■□□□ 1.36
HMGA2-208ENST00000537429 AP1S2P56377 157 aa23.56■■□□□ 1.36
HMGA2-208ENST00000537429 CDKL1Q00532 357 aa23.56■■□□□ 1.36
HMGA2-208ENST00000537429 GPR18Q14330 331 aa23.56■■□□□ 1.36
HMGA2-208ENST00000537429 PROX2Q3B8N5 592 aa23.56■■□□□ 1.36
HMGA2-208ENST00000537429 CCDC153Q494R4 210 aa23.56■■□□□ 1.36
HMGA2-208ENST00000537429 FRA10AC1Q70Z53 315 aa23.56■■□□□ 1.36
HMGA2-208ENST00000537429 KIAA2013Q8IYS2 634 aa23.56■■□□□ 1.36
HMGA2-208ENST00000537429 OR52E1Q8NGJ3 308 aa23.56■■□□□ 1.36
HMGA2-208ENST00000537429 PKP4Q99569 1192 aa23.56■■□□□ 1.36
HMGA2-208ENST00000537429 MENTQ9BUN1 341 aa23.56■■□□□ 1.36
HMGA2-208ENST00000537429 IQCGQ9H095 443 aaKnown RBP23.56■■□□□ 1.36
HMGA2-208ENST00000537429 CPSF2Q9P2I0 782 aaKnown RBP23.56■■□□□ 1.36
HMGA2-208ENST00000537429 PADI4Q9UM07 663 aa23.56■■□□□ 1.36
HMGA2-208ENST00000537429 U3KQA8 63 aa23.56■■□□□ 1.36
HMGA2-208ENST00000537429 SYCE1LA8MT33 242 aa23.55■■□□□ 1.36
HMGA2-208ENST00000537429 NUDT21O43809 227 aaKnown RBP23.55■■□□□ 1.36
HMGA2-208ENST00000537429 PLIN3O60664 434 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms