RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 IGSF21Q96ID5 467 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 RBM4BQ9BQ04 359 aaKnown RBP15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 RBM4Q9BWF3 364 aaKnown RBP15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 TOR3AQ9H497 397 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 KAT8Q9H7Z6 458 aaKnown RBP15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 ACTR8Q9H981 624 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 CARS2Q9HA77 564 aaKnown RBP15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 DCAF13Q9NV06 445 aaKnown RBP15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 USE1Q9NZ43 259 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 KLHL42Q9P2K6 505 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 PLXNA4Q9HCM2 1894 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 TRBV5-3A0A0A0MS03 114 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 SH3PXD2BA1X283 911 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 C16orf96A6NNT2 1141 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 GNGT2O14610 69 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 ANXA5P08758 320 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 IL1RNP18510 177 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 CRHBPP24387 322 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 POLR2IP36954 125 aaKnown RBP15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 SPAM1P38567 509 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 NSG1P42857 185 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 RANBP1P43487 201 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 ENTPD1P49961 510 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 PPP2R2BQ00005 443 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 ARHGEF7Q14155 803 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 SGO1Q5FBB7 561 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 Q6ZNB5 142 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 TMEM150AQ86TG1 271 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 ADHFE1Q8IWW8 467 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 FAM9CQ8IZT9 166 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 APCDD1Q8J025 514 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 ADAMTS19Q8TE59 1207 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 HDAC2Q92769 488 aaKnown RBP15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 FAM162AQ96A26 154 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 MAGIXQ9H6Y5 334 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 ATP13A3Q9H7F0 1226 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 ABT1Q9ULW3 272 aaKnown RBP15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 SCAMP3O14828 347 aaKnown RBP15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 B4GAT1O43505 415 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 ABCB7O75027 752 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 SEC14L2O76054 403 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 PRKD3O94806 890 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 BCKDHAP12694 445 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 SHMT2P34897 504 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 NKG7Q16617 165 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 PLA2G4EQ3MJ16 856 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 SUSD1Q6UWL2 747 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 TMEM26Q6ZUK4 368 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 GPR149Q86SP6 731 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 METTL3Q86U44 580 aaKnown RBP15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 MICU2Q8IYU8 434 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 ZNF555Q8NEP9 628 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 FNDC8Q8TC99 324 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 PXYLP1Q8TE99 480 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 SLC22A12Q96S37 553 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 TBCDQ9BTW9 1192 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 SLC32A1Q9H598 525 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 KCTD5Q9NXV2 234 aa15.68■□□□□ 0.1
CHMP1A-202ENST00000535997 NOL3O60936 208 aaKnown RBP15.67■□□□□ 0.1
CHMP1A-202ENST00000535997 GGT5P36269 586 aa15.67■□□□□ 0.1
CHMP1A-202ENST00000535997 NRIP1P48552 1158 aa15.67■□□□□ 0.1
CHMP1A-202ENST00000535997 RPIAP49247 311 aa15.67■□□□□ 0.1
CHMP1A-202ENST00000535997 CLDN8P56748 225 aa15.67■□□□□ 0.1
CHMP1A-202ENST00000535997 SKIV2LQ15477 1246 aaKnown RBP15.67■□□□□ 0.1
CHMP1A-202ENST00000535997 FGD3Q5JSP0 725 aa15.67■□□□□ 0.1
CHMP1A-202ENST00000535997 LRIF1Q5T3J3 769 aa15.67■□□□□ 0.1
CHMP1A-202ENST00000535997 ELMSAN1Q6PJG2 1045 aa15.67■□□□□ 0.1
CHMP1A-202ENST00000535997 FAM217AQ8IXS0 508 aa15.67■□□□□ 0.1
CHMP1A-202ENST00000535997 TTC16Q8NEE8 873 aa15.67■□□□□ 0.1
CHMP1A-202ENST00000535997 RAET1EQ8TD07 263 aa15.67■□□□□ 0.1
CHMP1A-202ENST00000535997 LYSMD1Q96S90 227 aa15.67■□□□□ 0.1
CHMP1A-202ENST00000535997 KCNH6Q9H252 994 aa15.67■□□□□ 0.1
CHMP1A-202ENST00000535997 ADNPQ9H2P0 1102 aa15.67■□□□□ 0.1
CHMP1A-202ENST00000535997 SMURF2Q9HAU4 748 aa15.67■□□□□ 0.1
CHMP1A-202ENST00000535997 PCDHB14Q9Y5E9 798 aa15.67■□□□□ 0.1
CHMP1A-202ENST00000535997 A0A1W2PPW3 197 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 CREG1O75629 220 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 ZXDBP98169 803 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 PON2Q15165 354 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 ZNF829Q3KNS6 432 aaPredicted RBP15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 GCNT7Q6ZNI0 430 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 CALHM3Q86XJ0 350 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 BHMTQ93088 406 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 PAIP1Q9H074 479 aaKnown RBP15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 FANCEQ9HB96 536 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 PARVBQ9HBI1 364 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 MAN2B2Q9Y2E5 1009 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 PCDHGA8Q9Y5G5 932 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 EIF3FO00303 357 aaPredicted RBP15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 PRPS2P11908 318 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 MATN1P21941 496 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 GSTM2P28161 218 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 GKP32189 559 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 IST1P53990 364 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 RPS14P62263 151 aaKnown RBP15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 C16orf72Q14CZ0 275 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 CPSF6Q16630 551 aaKnown RBP eCLIP15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 C6orf141Q5SZD1 244 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 XAF1Q6GPH4 301 aa15.66■□□□□ 0.1
CHMP1A-202ENST00000535997 TPGS1Q6ZTW0 290 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms