RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	ZBTB2	Q8N680	514 aa		11.2	□□□□□ -0.62
CTNND1-238	ENST00000534647	RBMXL3	Q8N7X1	1067 aa	Known RBP	11.2	□□□□□ -0.62
CTNND1-238	ENST00000534647	FDCSP	Q8NFU4	85 aa		11.2	□□□□□ -0.62
CTNND1-238	ENST00000534647	OR4E2	Q8NGC2	313 aa		11.2	□□□□□ -0.62
CTNND1-238	ENST00000534647	OR1L3	Q8NH93	324 aa		11.2	□□□□□ -0.62
CTNND1-238	ENST00000534647	HEXDC	Q8WVB3	486 aa		11.2	□□□□□ -0.62
CTNND1-238	ENST00000534647	P3H4	Q92791	437 aa		11.2	□□□□□ -0.62
CTNND1-238	ENST00000534647	DHRS4	Q9BTZ2	278 aa		11.2	□□□□□ -0.62
CTNND1-238	ENST00000534647	NUDT9	Q9BW91	350 aa		11.2	□□□□□ -0.62
CTNND1-238	ENST00000534647	SLC29A3	Q9BZD2	475 aa		11.2	□□□□□ -0.62
CTNND1-238	ENST00000534647	TFB2M	Q9H5Q4	396 aa	Known RBP	11.2	□□□□□ -0.62
CTNND1-238	ENST00000534647	SLAMF7	Q9NQ25	335 aa		11.2	□□□□□ -0.62
CTNND1-238	ENST00000534647	PCMTD2	Q9NV79	361 aa		11.2	□□□□□ -0.62
CTNND1-238	ENST00000534647	SOHLH2	Q9NX45	425 aa		11.2	□□□□□ -0.62
CTNND1-238	ENST00000534647	SERTAD3	Q9UJW9	196 aa		11.2	□□□□□ -0.62
CTNND1-238	ENST00000534647	AMFR	Q9UKV5	643 aa		11.2	□□□□□ -0.62
CTNND1-238	ENST00000534647	SNX12	Q9UMY4	172 aa		11.2	□□□□□ -0.62
CTNND1-238	ENST00000534647	DOPEY1	Q5JWR5	2465 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	SHANK1	Q9Y566	2161 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	PSTPIP1	O43586	416 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	BUD23	O43709	281 aa	Known RBP	11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	KLHL41	O60662	606 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	ANXA9	O76027	345 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	POLR2C	P19387	275 aa	Predicted RBP	11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	COMT	P21964	271 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	CDH3	P22223	829 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	PRDX3	P30048	256 aa	Known RBP	11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	AKT1	P31749	480 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	PREP	P48147	710 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	CD151	P48509	253 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	PRLHR	P49683	370 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	HADHB	P55084	474 aa	Known RBP	11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	XIAP	P98170	497 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	MSLN	Q13421	630 aa	Predicted RBP	11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	C11orf91	Q3C1V1	193 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	ZNF658B	Q4V348	819 aa	Predicted RBP	11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	TFDP3	Q5H9I0	405 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	PRAMEF17	Q5VTA0	474 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	ZNF385C	Q66K41	422 aa	Predicted RBP	11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	SLC6A19	Q695T7	634 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	HIST2H2BC	Q6DN03	193 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	FAM198B	Q6UWH4	519 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	IGFL3	Q6UXB1	125 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	SPOCD1	Q6ZMY3	1216 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	SYTL1	Q8IYJ3	562 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	CFAP206	Q8IYR0	622 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	RCOR2	Q8IZ40	523 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	IPMK	Q8NFU5	416 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	HM13	Q8TCT9	377 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	LCN9	Q8WX39	176 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	CLIP3	Q96DZ5	547 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	CAPZA3	Q96KX2	299 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	RMDN2	Q96LZ7	410 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	PPM1M	Q96MI6	270 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	QKI	Q96PU8	341 aa	Known RBP eCLIP	11.19	□□□□□ -0.62	8e-9	■■□□□ 11.4
CTNND1-238	ENST00000534647	OSBPL9	Q96SU4	736 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	C17orf62	Q9BQA9	187 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	FSD1L	Q9BXM9	530 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	TLR10	Q9BXR5	811 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	CHRNA10	Q9GZZ6	450 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	SRMS	Q9H3Y6	488 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	ASB8	Q9H765	288 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	ACTR5	Q9H9F9	607 aa	Predicted RBP	11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	GPR83	Q9NYM4	423 aa		11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	KLHL8	Q9P2G9	620 aa	Predicted RBP	11.19	□□□□□ -0.62
CTNND1-238	ENST00000534647	MED13	Q9UHV7	2174 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	PRRC2C	Q9Y520	2896 aa	Known RBP	11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	ESPL1	Q14674	2120 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	ITPR2	Q14571	2701 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	hCG_1818297	A0A087WSY0	165 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	TMEM150C	B9EJG8	249 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	ZNF185	O15231	689 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	KLF7	O75840	302 aa	Predicted RBP	11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	CBX6	O95503	412 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	AGT	P01019	485 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	IGHE	P01854	428 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	POLB	P06746	335 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	CD63	P08962	238 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	RALB	P11234	206 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	PBLD	P30039	288 aa	Predicted RBP	11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	ADRA1A	P35348	466 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	GEM	P55040	296 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	SOX8	P57073	446 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	RPA4	Q13156	261 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	CBLB	Q13191	982 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	KRT33B	Q14525	404 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	SSPN	Q14714	243 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	PTPRCAP	Q14761	206 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	NCF4	Q15080	339 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	TEX35	Q5T0J7	233 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	VWA5B1	Q5TIE3	1220 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	C11orf63	Q6NUN7	778 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	DUS1L	Q6P1R4	473 aa	Known RBP	11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	FBXO38	Q6PIJ6	1188 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	DET1	Q7L5Y6	550 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	ZC3H18	Q86VM9	953 aa	Known RBP	11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	KATNAL2	Q8IYT4	538 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	OR4K2	Q8NGD2	314 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms