RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 TMEM126BQ8IUX1 230 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 SFRP1Q8N474 314 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 RSRC1Q96IZ7 334 aaKnown RBP13.08□□□□□ -0.32
BEST1-208ENST00000534553 P2RY13Q9BPV8 354 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 DPEP2Q9H4A9 486 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 CCDC154A6NI56 674 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 LOC730098B7Z3J9 87 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 GPR89AB7ZAQ6 455 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 H3BM21 787 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 MANBAO00462 879 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 INPP4BO15327 924 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 MMP20O60882 483 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 GPR89BP0CG08 455 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 CD1EP15812 388 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 PRPH2P23942 346 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 POLR2JP52435 117 aaKnown RBP13.07□□□□□ -0.32
BEST1-208ENST00000534553 TRIM25Q14258 630 aaKnown RBP13.07□□□□□ -0.32
BEST1-208ENST00000534553 CST6Q15828 149 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 MUM1Q2TAK8 710 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 PTCHD3Q3KNS1 767 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 PIP5KL1Q5T9C9 394 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 CACHD1Q5VU97 1274 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 LIPJQ5W064 366 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 PARM1Q6UWI2 310 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 BEND7Q8N7W2 519 aaPredicted RBP13.07□□□□□ -0.32
BEST1-208ENST00000534553 ZNF513Q8N8E2 541 aaPredicted RBP13.07□□□□□ -0.32
BEST1-208ENST00000534553 DCBLD1Q8N8Z6 715 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 SNX31Q8N9S9 440 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 FGF14Q92915 247 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 GPATCH1Q9BRR8 931 aaKnown RBP13.07□□□□□ -0.32
BEST1-208ENST00000534553 CLEC1BQ9P126 229 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 ABCD2Q9UBJ2 740 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 KLQ9UEF7 1012 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 GIMAP2Q9UG22 337 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 ZNF490Q9ULM2 529 aaPredicted RBP13.07□□□□□ -0.32
BEST1-208ENST00000534553 TMED5Q9Y3A6 229 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 CCL27Q9Y4X3 112 aa13.07□□□□□ -0.32
BEST1-208ENST00000534553 RFXAPO00287 272 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 NVLO15381 856 aaKnown RBP13.06□□□□□ -0.32
BEST1-208ENST00000534553 MAP3K7O43318 606 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 RSL1D1O76021 490 aaKnown RBP13.06□□□□□ -0.32
BEST1-208ENST00000534553 CAPN3P20807 821 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 MAPK1P28482 360 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 BMP8BP34820 402 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 DPP6P42658 865 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 HTR6P50406 440 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 METAP1P53582 386 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 PNLIPRP1P54315 467 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 SESN3P58005 492 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 CNTN1Q12860 1018 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 VPS26BQ4G0F5 336 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 ZNF658BQ4V348 819 aaPredicted RBP13.06□□□□□ -0.32
BEST1-208ENST00000534553 C10orf62Q5T681 223 aaPredicted RBP13.06□□□□□ -0.32
BEST1-208ENST00000534553 MBOAT1Q6ZNC8 495 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 DHDDSQ86SQ9 333 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 ZFAND4Q86XD8 727 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 TRAPPC5Q8IUR0 188 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 HM13Q8TCT9 377 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 CSGALNACT1Q8TDX6 532 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 HIC2Q96JB3 615 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 ZBTB18Q99592 522 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 MUC13Q9H3R2 512 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 ELOVL6Q9H5J4 265 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 C6orf203Q9P0P8 240 aaPredicted RBP13.06□□□□□ -0.32
BEST1-208ENST00000534553 RNF11Q9Y3C5 154 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 DNMT3AQ9Y6K1 912 aaPredicted RBP13.06□□□□□ -0.32
BEST1-208ENST00000534553 ARHGEF33A8MVX0 844 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 E7ENX8 843 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 LILRB5O75023 590 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 ACADSP16219 412 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 BNIP2Q12982 314 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 RPA4Q13156 261 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 COL13A1Q5TAT6 717 aaPredicted RBP13.06□□□□□ -0.32
BEST1-208ENST00000534553 ZNF776Q68DI1 518 aaPredicted RBP13.06□□□□□ -0.32
BEST1-208ENST00000534553 SDE2Q6IQ49 451 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 CYP20A1Q6UW02 462 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 PROKR1Q8TCW9 393 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 DNAJC9Q8WXX5 260 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 CHFRQ96EP1 664 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 METTL2AQ96IZ6 378 aaKnown RBP13.06□□□□□ -0.32
BEST1-208ENST00000534553 TRIM15Q9C019 465 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 LRTM1Q9HBL6 345 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 SLC52A3Q9NQ40 469 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 ITM2CQ9NQX7 267 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 C1orf109Q9NX04 203 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 GPRC5BQ9NZH0 403 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 PSMD13Q9UNM6 376 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 COQ6Q9Y2Z9 468 aa13.06□□□□□ -0.32
BEST1-208ENST00000534553 TCF20Q9UGU0 1960 aaKnown RBP13.05□□□□□ -0.32
BEST1-208ENST00000534553 ACOT8O14734 319 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 DNAJA2O60884 412 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 JUPP14923 745 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 XRCC1P18887 633 aaPredicted RBP13.05□□□□□ -0.32
BEST1-208ENST00000534553 EPORP19235 508 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 DRD3P35462 400 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 HNF4AP41235 474 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 STARD3Q14849 445 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 TAF11Q15544 211 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 AGBL4Q5VU57 503 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 IRAK1BP1Q5VVH5 260 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms