RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 EPOP01588 193 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 ALDOAP04075 364 aaKnown RBP17.22■□□□□ 0.35
PHRF1-205ENST00000533464 ITPKBP27987 946 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 CCR10P46092 362 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 EEFSECP57772 596 aaKnown RBP17.22■□□□□ 0.35
PHRF1-205ENST00000533464 ZNF846Q147U1 533 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 BRAT1Q6PJG6 821 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 CDHR3Q6ZTQ4 885 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 KIAA1191Q96A73 305 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 CGREF1Q99674 301 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 ADAMTS5Q9UNA0 930 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 C5P01031 1676 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 FGF3P11487 239 aaPredicted RBP17.22■□□□□ 0.35
PHRF1-205ENST00000533464 PRPS1L1P21108 318 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 HNMTP50135 292 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 LARS2Q15031 903 aaKnown RBP17.22■□□□□ 0.35
PHRF1-205ENST00000533464 IFNLR1Q8IU57 520 aaPredicted RBP17.22■□□□□ 0.35
PHRF1-205ENST00000533464 TTC29Q8NA56 475 aaPredicted RBP17.22■□□□□ 0.35
PHRF1-205ENST00000533464 DNASE1L2Q92874 299 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 GTPBP3Q969Y2 492 aaKnown RBP17.22■□□□□ 0.35
PHRF1-205ENST00000533464 PDE10AQ9Y233 779 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 INSL6Q9Y581 213 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 DGKBQ9Y6T7 804 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 SLC35G6P0C7Q6 338 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 SAGP10523 405 aaPredicted RBP17.22■□□□□ 0.35
PHRF1-205ENST00000533464 IVDP26440 423 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 ZNF252P-AS1Q0IIN9 211 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 DENND5AQ6IQ26 1287 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 SATL1Q86VE3 508 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 GPR135Q8IZ08 494 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 OR10T2Q8NGX3 314 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 HM13Q8TCT9 377 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 DERL2Q9GZP9 239 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 ZBTB26Q9HCK0 441 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 INSL5Q9Y5Q6 135 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 H3BNH8 94 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 DCLK1O15075 740 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 ZNF623O75123 536 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 PROZP22891 400 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 CASP9P55211 416 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 AP1S2P56377 157 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 IFI44LQ53G44 452 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 PYDC2Q56P42 97 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 FRG2Q64ET8 278 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 TPRG1Q6ZUI0 275 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 DCAF4L2Q8NA75 395 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 OR4F6Q8NGB9 312 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 FRG2BQ96QU4 278 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 PCBD2Q9H0N5 130 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 MRPL39Q9NYK5 338 aaKnown RBP17.22■□□□□ 0.35
PHRF1-205ENST00000533464 ERN1O75460 977 aaKnown RBP17.21■□□□□ 0.35
PHRF1-205ENST00000533464 GALTP07902 379 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 CLK3P49761 638 aaKnown RBP17.21■□□□□ 0.35
PHRF1-205ENST00000533464 TAF8Q7Z7C8 310 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 HDDC3Q8N4P3 179 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 TMEM40Q8WWA1 233 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 TRIB2Q92519 343 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 SLC38A4Q969I6 547 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 NUS1Q96E22 293 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 C1orf21Q9H246 121 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 DPEP2Q9H4A9 486 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 NSUN3Q9H649 340 aaKnown RBP17.21■□□□□ 0.35
PHRF1-205ENST00000533464 CMTM6Q9NX76 183 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 ARPC2O15144 300 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 LGALS3BPQ08380 585 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 MMAAQ8IVH4 418 aaKnown RBP17.21■□□□□ 0.35
PHRF1-205ENST00000533464 FAM98AQ8NCA5 519 aaKnown RBP17.21■□□□□ 0.35
PHRF1-205ENST00000533464 DNAJB8Q8NHS0 232 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 ZCCHC10Q8TBK6 192 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 BORCS5Q969J3 196 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 PRICKLE1Q96MT3 831 aaPredicted RBP17.21■□□□□ 0.35
PHRF1-205ENST00000533464 TDP1Q9NUW8 608 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 ZNF282Q9UDV7 671 aaPredicted RBP17.21■□□□□ 0.35
PHRF1-205ENST00000533464 IL36AQ9UHA7 158 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 MYH11P35749 1972 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 COL2A1P02458 1487 aaPredicted RBP17.21■□□□□ 0.35
PHRF1-205ENST00000533464 RGPD5Q99666 1765 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 FAM86C2PA6NEL3 165 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 SLBPQ14493 270 aaKnown RBP eCLIP17.21■□□□□ 0.35
PHRF1-205ENST00000533464 NDUFAF6Q330K2 333 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 MRM3Q9HC36 420 aaKnown RBP17.21■□□□□ 0.35
PHRF1-205ENST00000533464 ZSCAN32Q9NX65 697 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 ZIM2Q9NZV7 527 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 SATB2Q9UPW6 733 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 MYH13Q9UKX3 1938 aa17.21■□□□□ 0.35
PHRF1-205ENST00000533464 TGFB1P01137 390 aa17.21■□□□□ 0.34
PHRF1-205ENST00000533464 VARSP26640 1264 aaKnown RBP17.21■□□□□ 0.34
PHRF1-205ENST00000533464 LRRC66Q68CR7 880 aa17.21■□□□□ 0.34
PHRF1-205ENST00000533464 TNFAIP8L2Q6P589 184 aaPredicted RBP17.21■□□□□ 0.34
PHRF1-205ENST00000533464 TXNDC5Q8NBS9 432 aaKnown RBP17.21■□□□□ 0.34
PHRF1-205ENST00000533464 FEM1AQ9BSK4 669 aa17.21■□□□□ 0.34
PHRF1-205ENST00000533464 ZSCAN5AQ9BUG6 496 aa17.21■□□□□ 0.34
PHRF1-205ENST00000533464 C10orf71Q711Q0 1435 aa17.2■□□□□ 0.34
PHRF1-205ENST00000533464 LOC730098B7Z3J9 87 aa17.2■□□□□ 0.34
PHRF1-205ENST00000533464 H6PDO95479 791 aa17.2■□□□□ 0.34
PHRF1-205ENST00000533464 IQCF3P0C7M6 154 aa17.2■□□□□ 0.34
PHRF1-205ENST00000533464 MYL9P24844 172 aa17.2■□□□□ 0.34
PHRF1-205ENST00000533464 CCNFP41002 786 aa17.2■□□□□ 0.34
PHRF1-205ENST00000533464 HKDC1Q2TB90 917 aa17.2■□□□□ 0.34
PHRF1-205ENST00000533464 PDE12Q6L8Q7 609 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms