RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 ZNF655Q8N720 491 aaPredicted RBP11.85□□□□□ -0.51
SRPRA-202ENST00000527817 NAT14Q8WUY8 206 aa11.85□□□□□ -0.51
SRPRA-202ENST00000527817 HEXDCQ8WVB3 486 aa11.85□□□□□ -0.51
SRPRA-202ENST00000527817 FKBP10Q96AY3 582 aa11.85□□□□□ -0.51
SRPRA-202ENST00000527817 DCUN1D1Q96GG9 259 aa11.85□□□□□ -0.51
SRPRA-202ENST00000527817 CNDP1Q96KN2 507 aa11.85□□□□□ -0.51
SRPRA-202ENST00000527817 NAP1L5Q96NT1 182 aaPredicted RBP11.85□□□□□ -0.51
SRPRA-202ENST00000527817 FCRL5Q96RD9 977 aa11.85□□□□□ -0.51
SRPRA-202ENST00000527817 NDC1Q9BTX1 674 aa11.85□□□□□ -0.51
SRPRA-202ENST00000527817 XKR8Q9H6D3 395 aa11.85□□□□□ -0.51
SRPRA-202ENST00000527817 CTTNBP2NLQ9P2B4 639 aa11.85□□□□□ -0.51
SRPRA-202ENST00000527817 ITGB1BP2Q9UKP3 347 aa11.85□□□□□ -0.51
SRPRA-202ENST00000527817 A0A1B0GTH6 734 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 C2orf81A6NN90 581 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 SRP72O76094 671 aaKnown RBP11.84□□□□□ -0.51
SRPRA-202ENST00000527817 CTSBP07858 339 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 PIM1P11309 404 aaPredicted RBP11.84□□□□□ -0.51
SRPRA-202ENST00000527817 ATP1B2P14415 290 aaPredicted RBP11.84□□□□□ -0.51
SRPRA-202ENST00000527817 COX6B1P14854 86 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 NFKB1P19838 968 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 PDHA2P29803 388 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 GCGRP47871 477 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 NR2C2P49116 596 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 TDGF1P3P51864 188 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 XIAPP98170 497 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 WASHC5Q12768 1159 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 RPA4Q13156 261 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 MFAP5Q13361 173 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 MPP3Q13368 585 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 SLC9A5Q14940 896 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 NR1I3Q14994 352 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 PRKD1Q15139 912 aaPredicted RBP11.84□□□□□ -0.51
SRPRA-202ENST00000527817 ZNF658BQ4V348 819 aaPredicted RBP11.84□□□□□ -0.51
SRPRA-202ENST00000527817 MTFR2Q6P444 385 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 ZNF449Q6P9G9 518 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 ISLR2Q6UXK2 745 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 SPNS3Q6ZMD2 512 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 MRGPRGQ86SM5 289 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 ZNF295-AS1Q8N0V1 137 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 NXPE1Q8N323 547 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 CATSPER1Q8NEC5 780 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 OR1N1Q8NGS0 311 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 DENND1AQ8TEH3 1009 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 TFGQ92734 400 aaPredicted RBP11.84□□□□□ -0.51
SRPRA-202ENST00000527817 DLG3Q92796 817 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 OXNAD1Q96HP4 312 aaPredicted RBP11.84□□□□□ -0.51
SRPRA-202ENST00000527817 VPS50Q96JG6 964 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 OR2A14Q96R47 310 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 SLC26A1Q9H2B4 701 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 DEF6Q9H4E7 631 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 WDR54Q9H977 334 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 COG4Q9H9E3 785 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 MRM3Q9HC36 420 aaKnown RBP11.84□□□□□ -0.51
SRPRA-202ENST00000527817 SUCOQ9UBS9 1254 aaKnown RBP11.84□□□□□ -0.51
SRPRA-202ENST00000527817 CDC23Q9UJX2 597 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 PLCL2Q9UPR0 1127 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 HS3ST3B1Q9Y662 390 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 NUP210LQ5VU65 1888 aa11.84□□□□□ -0.51
SRPRA-202ENST00000527817 NIPBLQ6KC79 2804 aaeCLIP11.84□□□□□ -0.51
SRPRA-202ENST00000527817 A0A0J9YY10 115 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 KLHL18O94889 574 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 H2AFZP0C0S5 128 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 ATXN8OSP0DMR3 200 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 UGT2B7P16662 529 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 CAPN3P20807 821 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 ALAS2P22557 587 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 ARSFP54793 590 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 KCNK10P57789 538 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 PRKG2Q13237 762 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 TAF1AQ15573 450 aaPredicted RBP11.83□□□□□ -0.52
SRPRA-202ENST00000527817 NKG7Q16617 165 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.83□□□□□ -0.52
SRPRA-202ENST00000527817 DEFB110Q30KQ9 67 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 TUBB8Q3ZCM7 444 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 VWA2Q5GFL6 755 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 XKRXQ6PP77 449 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 RPTNQ6XPR3 784 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 UNC5AQ6ZN44 842 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 H2AFVQ71UI9 128 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 TRIM73Q86UV7 250 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 OR4K2Q8NGD2 314 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 FLVCR1-AS1Q8TAF5 88 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 TFB1MQ8WVM0 346 aaKnown RBP11.83□□□□□ -0.52
SRPRA-202ENST00000527817 NR4A3Q92570 626 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 ULK4Q96C45 1275 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 CCDC120Q96HB5 630 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 THOC3Q96J01 351 aaKnown RBP11.83□□□□□ -0.52
SRPRA-202ENST00000527817 C19orf43Q9BQ61 176 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 TRIM8Q9BZR9 551 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 NENFQ9UMX5 172 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 ICKQ9UPZ9 632 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 ARL5AQ9Y689 179 aa11.83□□□□□ -0.52
SRPRA-202ENST00000527817 C5orf60A6NFR6 353 aa11.82□□□□□ -0.52
SRPRA-202ENST00000527817 CFAP99D6REC4 459 aa11.82□□□□□ -0.52
SRPRA-202ENST00000527817 ALOX12BO75342 701 aa11.82□□□□□ -0.52
SRPRA-202ENST00000527817 SNRPB2P08579 225 aaKnown RBP11.82□□□□□ -0.52
SRPRA-202ENST00000527817 CHRM5P08912 532 aaPredicted RBP11.82□□□□□ -0.52
SRPRA-202ENST00000527817 GSTM1P09488 218 aa11.82□□□□□ -0.52
SRPRA-202ENST00000527817 ITGAXP20702 1163 aa11.82□□□□□ -0.52
SRPRA-202ENST00000527817 SSTR2P30874 369 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms