RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 KPNA5O15131 536 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 DUX1O43812 170 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 ZBTB14O43829 449 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 SPAG6O75602 509 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 DKK1O94907 266 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 MATN4O95460 622 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 CPNE6O95741 557 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 TSPAN12O95859 305 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 STATHP02808 62 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 GP1BAP07359 652 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 CTSBP07858 339 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 INHBAP08476 426 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 ADRB1P08588 477 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 CHRM5P08912 532 aaPredicted RBP4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 C1QTNF9P0C862 333 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 SLC35E2BP0CK96 405 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 CCDC166P0CW27 439 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 UGT2B7P16662 529 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 STMN1P16949 149 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 ZNF37AP17032 561 aaPredicted RBP4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 TNFRSF8P28908 595 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 SPRP35270 261 aaPredicted RBP4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 ETV5P41161 510 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 GRIA3P42263 894 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 MSH2P43246 934 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 GPR3P46089 330 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 GLRBP48167 497 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 KCNC1P48547 511 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 KPNA2P52292 529 aaKnown RBP4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 MAPK10P53779 464 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 INHBCP55103 352 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 IL2P60568 153 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 RAB10P61026 200 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 SH3BP2P78314 561 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 E2F1Q01094 437 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 FRG1Q14331 258 aaKnown RBP4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 CSHL1Q14406 222 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 NR1D2Q14995 579 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 OR4D1Q15615 310 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 TSNQ15631 228 aaKnown RBP4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 ISXQ2M1V0 245 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 ZXDCQ2QGD7 858 aaPredicted RBP4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 DEFB110Q30KQ9 67 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 TTLL9Q3SXZ7 439 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 PRAMEF17Q5VTA0 474 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 CACHD1Q5VU97 1274 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 CDCP2Q5VXM1 449 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 ARMC3Q5W041 872 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 UGT3A1Q6NUS8 523 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 ARMC6Q6NXE6 501 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 RBM44Q6ZP01 1051 aaKnown RBP4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 TRMT10CQ7L0Y3 403 aaKnown RBP4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 AMIGO1Q86WK6 493 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 FAM129CQ86XR2 697 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 RELL1Q8IUW5 271 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 SLITRK4Q8IW52 837 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 TBC1D21Q8IYX1 336 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 ADGRF3Q8IZF5 1079 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 CYP4X1Q8N118 509 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 MYO1HQ8N1T3 1032 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 PLD6Q8N2A8 252 aaKnown RBP4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 OR5K2Q8NHB8 316 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 GABPB2Q8TAK5 448 aaPredicted RBP4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 MDM1Q8TC05 714 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 DENND1AQ8TEH3 1009 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 AENQ8WTP8 325 aaKnown RBP4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 SLC44A1Q8WWI5 657 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 ASB11Q8WXH4 323 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 SH3KBP1Q96B97 665 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 PYCR2Q96C36 320 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 NXNL1Q96CM4 212 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 MOCOSQ96EN8 888 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 MED8Q96G25 268 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 NAF1Q96HR8 494 aaKnown RBP4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 FOPNLQ96NB1 174 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 FCRL4Q96PJ5 515 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 CYTH2Q99418 400 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 GPR22Q99680 433 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 MIPEPQ99797 713 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 FAM129AQ9BZQ8 928 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 PHACTR1Q9C0D0 580 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 ATG10Q9H0Y0 220 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 MVB12BQ9H7P6 319 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 APMAPQ9HDC9 416 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 SNX15Q9NRS6 342 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 NSMCE4AQ9NXX6 385 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 ACTR10Q9NZ32 417 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 NCKIPSDQ9NZQ3 722 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 PISDQ9UG56 409 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 SATB2Q9UPW6 733 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 WASF3Q9UPY6 502 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 SH2B3Q9UQQ2 575 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 PDE10AQ9Y233 779 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 PCDHGA1Q9Y5H4 931 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 HEBP2Q9Y5Z4 205 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 COMMD10Q9Y6G5 202 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 IKBKGQ9Y6K9 419 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 RALGAPA1Q6GYQ0 2036 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 EP300Q09472 2414 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms