RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 ALG9Q9H6U8 611 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 GAREM1Q9H706 876 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 ASB8Q9H765 288 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 AASDHPPTQ9NRN7 309 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 SPATS2LQ9NUQ6 558 aaKnown RBP6.94□□□□□ -1.3
VPS11-201ENST00000524454 SUSD2Q9UGT4 822 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 CRLS1Q9UJA2 301 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 RNF112Q9ULX5 631 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 SCML1Q9UN30 329 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 FNDC3AQ9Y2H6 1198 aaKnown RBP6.94□□□□□ -1.3
VPS11-201ENST00000524454 ASCC3Q8N3C0 2202 aaKnown RBP6.93□□□□□ -1.3
VPS11-201ENST00000524454 SPAARA0A1B0GVQ0 90 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 A0A1W2PPC4 97 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 A0A1W2PQU0 124 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 KLHL33A6NCF5 533 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 H0Y8X5 98 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 CCL22O00626 93 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 SLC31A1O15431 190 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 GYG2O15488 501 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 GRID2O43424 1007 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 BUD23O43709 281 aaKnown RBP6.93□□□□□ -1.3
VPS11-201ENST00000524454 SH3BP5O60239 455 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 NUAK1O60285 661 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 DIAPH2O60879 1101 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 RNGTTO60942 597 aaKnown RBP6.93□□□□□ -1.3
VPS11-201ENST00000524454 PCDH8O95206 1070 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 CLDN7O95471 211 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 UGT2B4P06133 528 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 SYPP08247 313 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 ALPIP09923 528 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 OR56A5P0C7T3 313 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 MPC1LP0DKB6 136 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 THRAP10827 490 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 CD59P13987 128 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 EZRP15311 586 aaKnown RBP6.93□□□□□ -1.3
VPS11-201ENST00000524454 SDHBP21912 280 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 LHCGRP22888 699 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 CD27P26842 260 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 FMO4P31512 558 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 DPP6P42658 865 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 AFF3P51826 1226 aaKnown RBP6.93□□□□□ -1.3
VPS11-201ENST00000524454 RAP1GDS1P52306 607 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 SEMG2Q02383 582 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 PLOD1Q02809 727 aaPredicted RBP6.93□□□□□ -1.3
VPS11-201ENST00000524454 PTSQ03393 145 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 ZNF33BQ06732 778 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 DPTQ07507 201 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 PCBP2Q15366 365 aaKnown RBP eCLIP6.93□□□□□ -1.3
VPS11-201ENST00000524454 SMAD1Q15797 465 aaKnown RBP6.93□□□□□ -1.3
VPS11-201ENST00000524454 PPP1R3AQ16821 1122 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 HLA-BQ31612 363 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 SPATS1Q496A3 300 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 LDLRAP1Q5SW96 308 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 PLEKHS1Q5SXH7 462 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 GPRC6AQ5T6X5 926 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 HENMT1Q5T8I9 393 aaKnown RBP6.93□□□□□ -1.3
VPS11-201ENST00000524454 ANKS6Q68DC2 871 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 PTRHD1Q6GMV3 140 aaKnown RBP6.93□□□□□ -1.3
VPS11-201ENST00000524454 OGFOD2Q6N063 350 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 PAQR3Q6TCH7 311 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 ERN2Q76MJ5 926 aaKnown RBP6.93□□□□□ -1.3
VPS11-201ENST00000524454 PARS2Q7L3T8 475 aaKnown RBP6.93□□□□□ -1.3
VPS11-201ENST00000524454 TAS2R42Q7RTR8 314 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 ERMP1Q7Z2K6 904 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 RABEPKQ7Z6M1 372 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 CUZD1Q86UP6 607 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 PIM3Q86V86 326 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 ZSWIM9Q86XI8 627 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 CLYBLQ8N0X4 340 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 MYO1HQ8N1T3 1032 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 PELI3Q8N2H9 469 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 FBXO39Q8N4B4 442 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 TEX9Q8N6V9 391 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 PAF1Q8N7H5 531 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 RP9Q8TA86 221 aaKnown RBP6.93□□□□□ -1.3
VPS11-201ENST00000524454 ZNF483Q8TF39 744 aaPredicted RBP6.93□□□□□ -1.3
VPS11-201ENST00000524454 TSPEARQ8WU66 669 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 FAM131CQ96AQ9 280 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 ZNF514Q96K75 400 aaPredicted RBP6.93□□□□□ -1.3
VPS11-201ENST00000524454 KLHL32Q96NJ5 620 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 ANKRD27Q96NW4 1050 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 ZNF382Q96SR6 550 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 EBF4Q9BQW3 602 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 TBC1D10AQ9BXI6 508 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 HDAC8Q9BY41 377 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 ZCCHC2Q9C0B9 1178 aaKnown RBP6.93□□□□□ -1.3
VPS11-201ENST00000524454 PCED1AQ9H1Q7 454 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 DYRK4Q9NR20 520 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 KLC4Q9NSK0 619 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 PNPOQ9NVS9 261 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 B4GALT6Q9UBX8 382 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 MARCOQ9UEW3 520 aaPredicted RBP6.93□□□□□ -1.3
VPS11-201ENST00000524454 ZFR2Q9UPR6 939 aaKnown RBP6.93□□□□□ -1.3
VPS11-201ENST00000524454 OARD1Q9Y530 152 aa6.93□□□□□ -1.3
VPS11-201ENST00000524454 DYTNA2CJ06 578 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 C16orf96A6NNT2 1141 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 C10orf142B7Z368 130 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 BTN3A1O00481 513 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 RAD51BO15315 384 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 SPINT1O43278 529 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms