RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ELMO2Q96JJ3 720 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 C16orf45Q96MC5 204 aaPredicted RBP20.02■□□□□ 0.8
TRIM35-203ENST00000521253 WDR83Q9BRX9 315 aaKnown RBP20.02■□□□□ 0.8
TRIM35-203ENST00000521253 FAM167BQ9BTA0 163 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 NAT9Q9BTE0 207 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 IARS2Q9NSE4 1012 aaKnown RBP20.02■□□□□ 0.8
TRIM35-203ENST00000521253 ACTR10Q9NZ32 417 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 GALPQ9UBC7 116 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 PILRAQ9UKJ1 303 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 FBXO5Q9UKT4 447 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 SNX24Q9Y343 169 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 SDK2Q58EX2 2172 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 C2orf74A8MZ97 194 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 EFSO43281 561 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 RAD1O60671 282 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 STK17BO94768 372 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 ZBTB11O95625 1053 aaPredicted RBP20.01■□□□□ 0.79
TRIM35-203ENST00000521253 EBLN1P0CF75 366 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 ERVK-10P10266 1014 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 CDH3P22223 829 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 ELK3P41970 407 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 MPP1Q00013 466 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 HIF1AQ16665 826 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 SPANXN3Q5MJ09 141 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 MANEAQ5SRI9 462 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 ARHGAP40Q5TG30 622 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 ZNF549Q6P9A3 640 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 CCDC81Q6ZN84 652 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 DCUN1D3Q8IWE4 304 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 D2HGDHQ8N465 521 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 SKA2Q8WVK7 121 aaPredicted RBP20.01■□□□□ 0.79
TRIM35-203ENST00000521253 RNF31Q96EP0 1072 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 PLAC1Q9HBJ0 212 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 C1GALT1Q9NS00 363 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 OR6C2Q9NZP2 312 aa20.01■□□□□ 0.79
TRIM35-203ENST00000521253 PIPSLA2A3N6 862 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 FAM187AA6NFU0 413 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 SLC9B1P1A6NJY1 282 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 E5RI56 91 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 RAD51CO43502 376 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 KDM1AO60341 852 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 RPN2P04844 631 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 FGF5P12034 268 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 ARL4CP56559 192 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 VAC14Q08AM6 782 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 TUBB3Q13509 450 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 GRB7Q14451 532 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 GBX1Q14549 363 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 GPR155Q7Z3F1 870 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 ZBTB2Q8N680 514 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 PITPNM3Q9BZ71 974 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 LATS2Q9NRM7 1088 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 SOHLH2Q9NX45 425 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 SPHK1Q9NYA1 384 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 ZC3H7BQ9UGR2 993 aaKnown RBP20■□□□□ 0.79
TRIM35-203ENST00000521253 CIDEBQ9UHD4 219 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 CHMP2BQ9UQN3 213 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 RUVBL2Q9Y230 463 aaKnown RBP20■□□□□ 0.79
TRIM35-203ENST00000521253 BTRCQ9Y297 605 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 MED16Q9Y2X0 877 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 TMEM184BQ9Y519 407 aaPredicted RBP20■□□□□ 0.79
TRIM35-203ENST00000521253 NFS1Q9Y697 457 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 TEX264Q9Y6I9 313 aa20■□□□□ 0.79
TRIM35-203ENST00000521253 K7ENP7 123 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 HAUS5O94927 633 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 DLGAP3O95886 979 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 CHRM5P08912 532 aaPredicted RBP19.99■□□□□ 0.79
TRIM35-203ENST00000521253 ZNF28P17035 718 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 PKLRP30613 574 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 ATP1A2P50993 1020 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 CLCN7P51798 805 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 ACY1Q03154 408 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 KYNUQ16719 465 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 CYB5D1Q6P9G0 228 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 INO80CQ6PI98 192 aaPredicted RBP19.99■□□□□ 0.79
TRIM35-203ENST00000521253 CNSTQ6PJW8 725 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 SPESP1Q6UW49 350 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 TIPARPQ7Z3E1 657 aaKnown RBP19.99■□□□□ 0.79
TRIM35-203ENST00000521253 MAATS1Q7Z4T9 603 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 PPP1R3BQ86XI6 285 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 RASGRP3Q8IV61 690 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 CACNA2D3Q8IZS8 1091 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 IL22RA1Q8N6P7 574 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 C2CD4AQ8NCU7 369 aaPredicted RBP19.99■□□□□ 0.79
TRIM35-203ENST00000521253 LRRC39Q96DD0 335 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 CFAP36Q96G28 342 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 ERP44Q9BS26 406 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 MENTQ9BUN1 341 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 ULBP3Q9BZM4 244 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 TWSG1Q9GZX9 223 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 CCDC68Q9H2F9 335 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 PDE7BQ9NP56 450 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 FGF21Q9NSA1 209 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 TSR3Q9UJK0 312 aaKnown RBP19.99■□□□□ 0.79
TRIM35-203ENST00000521253 RARRES3Q9UL19 164 aa19.99■□□□□ 0.79
TRIM35-203ENST00000521253 TEX51A0A1B0GUA7 166 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 SPAG6O75602 509 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 PVRP15151 417 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 ST6GAL1P15907 406 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 UGT2B7P16662 529 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms