RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 RHBDD2Q6NTF9 364 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 SCYL2Q6P3W7 929 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 GJB7Q6PEY0 223 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 MEX3BQ6ZN04 569 aaKnown RBP4.73□□□□□ -1.65
SDCBP-207ENST00000520168 Q6ZS46 218 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 CXXC5Q7LFL8 322 aaKnown RBP4.73□□□□□ -1.65
SDCBP-207ENST00000520168 LCA5Q86VQ0 697 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 LRRC49Q8IUZ0 686 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 C3orf20Q8ND61 904 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 BRSK1Q8TDC3 778 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 CA5BP1Q8WTZ4 195 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 PHF10Q8WUB8 498 aaKnown RBP4.73□□□□□ -1.65
SDCBP-207ENST00000520168 CPA5Q8WXQ8 436 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 MAGED4Q96JG8 741 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 MAGEB10Q96LZ2 347 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-207ENST00000520168 ALPK1Q96QP1 1244 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 AGAP2Q99490 1192 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 CRACR2AQ9BSW2 395 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 TLR10Q9BXR5 811 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 POLR1EQ9GZS1 481 aaKnown RBP4.73□□□□□ -1.65
SDCBP-207ENST00000520168 ZWILCHQ9H900 591 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 CBX8Q9HC52 389 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 SLC6A20Q9NP91 592 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 DLL4Q9NR61 685 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 STMN3Q9NZ72 180 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 COQ3Q9NZJ6 369 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 KCNN3Q9UGI6 736 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 AMACRQ9UHK6 382 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 DNAJC12Q9UKB3 198 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 DNAJC16Q9Y2G8 782 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 PCDHGB6Q9Y5F9 930 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 FHOD1Q9Y613 1164 aa4.73□□□□□ -1.65
SDCBP-207ENST00000520168 FBN1P35555 2871 aaKnown RBP4.73□□□□□ -1.65
SDCBP-207ENST00000520168 HRNRQ86YZ3 2850 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-207ENST00000520168 COL6A5A8TX70 2615 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 SIGLEC16A6NMB1 481 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 SMTNL1A8MU46 457 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 GOLGA6L19H0YKK7 550 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 C19orf84I3L1E1 186 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 ZNF749O43361 778 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 USP1O94782 785 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 RASAL1O95294 804 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 CLDN7O95471 211 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 IGLV1-40P01703 118 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 C8BP07358 591 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 PYGMP11217 842 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 PIM1P11309 404 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-207ENST00000520168 IGFBP2P18065 325 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 ERCC2P18074 760 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 NDUFS1P28331 727 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 SERPINB6P35237 376 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 MMP13P45452 471 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 NSFP46459 744 aaKnown RBP4.72□□□□□ -1.65
SDCBP-207ENST00000520168 PREPP48147 710 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 HCAR3P49019 387 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 TNFSF10P50591 281 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 IST1P53990 364 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 AP2B1P63010 937 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 TPM4P67936 248 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 CACNG1Q06432 222 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 GTF2H3Q13889 308 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 RPE65Q16518 533 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 PTCHD3Q3KNS1 767 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 TUBB8Q3ZCM7 444 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 VWA3BQ502W6 1294 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 KRTCAP3Q53RY4 240 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 RAB6CQ53S08 254 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 ZNF789Q5FWF6 425 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 CT47A1Q5JQC4 288 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-207ENST00000520168 ERMARDQ5T6L9 678 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 FAM69BQ5VUD6 431 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 NAA35Q5VZE5 725 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 ALG1LQ6GMV1 187 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 WDR59Q6PJI9 974 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 SARM1Q6SZW1 724 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 CRTC3Q6UUV7 619 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 CERS6Q6ZMG9 384 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 Q6ZPB1 254 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-207ENST00000520168 RFX8Q6ZV50 586 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 PPP1R32Q7Z5V6 425 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 CAMKMTQ7Z624 323 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 ADGRG6Q86SQ4 1221 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 TMEM200AQ86VY9 491 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 ANKRD13BQ86YJ7 626 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 PSTKQ8IV42 348 aaKnown RBP4.72□□□□□ -1.65
SDCBP-207ENST00000520168 ARHGAP12Q8IWW6 846 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 ATPAF2Q8N5M1 289 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 TRAM1L1Q8N609 369 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 VPS37AQ8NEZ2 397 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 OR1N1Q8NGS0 311 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 OR1L3Q8NH93 324 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 JOSD2Q8TAC2 188 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 SUN3Q8TAQ9 357 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 THAP3Q8WTV1 239 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-207ENST00000520168 NELFBQ8WX92 580 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 N4BP2L2Q92802 583 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-207ENST00000520168 HAS2Q92819 552 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 GLYATL1Q969I3 302 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 ITFG2Q969R8 447 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 FKBP10Q96AY3 582 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms