RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 GPR162Q16538 588 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 CTSL3PQ5NE16 218 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 PRAMEF19Q5SWL8 479 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 AHSA2Q719I0 299 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 SPATC1Q76KD6 591 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 VASH1Q7L8A9 365 aaPredicted RBP12.12□□□□□ -0.47
PCM1-203ENST00000517545 PRSS48Q7RTY5 328 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 MILR1Q7Z6M3 343 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 SVOPQ8N4V2 548 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 NKAPQ8N5F7 415 aaKnown RBP12.12□□□□□ -0.47
PCM1-203ENST00000517545 CD200R1Q8TD46 325 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 MYEOVQ96EZ4 313 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 PKMYT1Q99640 499 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 POLR1EQ9GZS1 481 aaKnown RBP12.12□□□□□ -0.47
PCM1-203ENST00000517545 SCN3BQ9NY72 215 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 TRMT6Q9UJA5 497 aaKnown RBP12.12□□□□□ -0.47
PCM1-203ENST00000517545 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.12□□□□□ -0.47
PCM1-203ENST00000517545 GMPPBQ9Y5P6 360 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 ARL5CA6NH57 179 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 MYO1GB0I1T2 1018 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 TNFRSF10BO14763 440 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 TBX18O95935 607 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 F2P00734 622 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 AKT1P31749 480 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 KRT20P35900 424 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 ZNF140P52738 457 aaPredicted RBP12.12□□□□□ -0.47
PCM1-203ENST00000517545 PHC1P78364 1004 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.12□□□□□ -0.47
PCM1-203ENST00000517545 RAP1GAP2Q684P5 730 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 GALNT10Q86SR1 603 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 LACC1Q8IV20 430 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 CCDC71Q8IV32 467 aaPredicted RBP12.12□□□□□ -0.47
PCM1-203ENST00000517545 ACBD6Q9BR61 282 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 TMEM248Q9NWD8 314 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 TESMINQ9Y4I5 508 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 PLXNB2O15031 1838 aa12.12□□□□□ -0.47
PCM1-203ENST00000517545 PABPN1LA6NDY0 278 aaKnown RBP12.11□□□□□ -0.47
PCM1-203ENST00000517545 PGLSO95336 258 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 C1QCP02747 245 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 PGRP06401 933 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 PTPN2P17706 415 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 CASP3P42574 277 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 NRIP1P48552 1158 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 CLK1P49759 484 aaKnown RBP12.11□□□□□ -0.47
PCM1-203ENST00000517545 HUNKP57058 714 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 IL2P60568 153 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 COPZ1P61923 177 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 UPP1Q16831 310 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 RFX4Q33E94 735 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 RUNDC3AQ59EK9 446 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 ZC3H12BQ5HYM0 836 aaKnown RBP12.11□□□□□ -0.47
PCM1-203ENST00000517545 CAPN13Q6MZZ7 669 aaPredicted RBP12.11□□□□□ -0.47
PCM1-203ENST00000517545 FBXL22Q6P050 247 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 ZDHHC21Q8IVQ6 265 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 SCN4BQ8IWT1 228 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 TRIM62Q9BVG3 475 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 TMEM45AQ9NWC5 275 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 CCL27Q9Y4X3 112 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 OR2A25A4D2G3 310 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 AREL1O15033 823 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 NTRK1P04629 796 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 DBTP11182 482 aaKnown RBP12.11□□□□□ -0.47
PCM1-203ENST00000517545 CRYBB1P53674 252 aaPredicted RBP12.11□□□□□ -0.47
PCM1-203ENST00000517545 ZNF235Q14590 738 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 MFSD10Q14728 455 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 ZNF404Q494X3 552 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 SOWAHCQ53LP3 525 aaPredicted RBP12.11□□□□□ -0.47
PCM1-203ENST00000517545 SGO1Q5FBB7 561 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 SHQ1Q6PI26 577 aaKnown RBP12.11□□□□□ -0.47
PCM1-203ENST00000517545 MMAAQ8IVH4 418 aaKnown RBP12.11□□□□□ -0.47
PCM1-203ENST00000517545 LIX1Q8N485 282 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 SETD9Q8NE22 299 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 MDGA1Q8NFP4 955 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 ATL1Q8WXF7 558 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 EXOC2Q96KP1 924 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 C1orf74Q96LT6 269 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 SERPINB11Q96P15 392 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 RNF167Q9H6Y7 350 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 RNF181Q9P0P0 153 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 KCNH4Q9UQ05 1017 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 AGAP5A6NIR3 686 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 H0Y626 953 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 SSX4O60224 188 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 RAMP2O60895 175 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 VPS26AO75436 327 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 TRIM16O95361 564 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 RETP07949 1114 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 HMBSP08397 361 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 PKMP14618 531 aaKnown RBP12.11□□□□□ -0.47
PCM1-203ENST00000517545 ANKRD46Q86W74 232 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 SYTL1Q8IYJ3 562 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 CELF2-AS1Q8N7Q2 184 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 ELMO1Q92556 727 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 PEX13Q92968 403 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 PYURFQ96I23 114 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 ZBTB18Q99592 522 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 DPY30Q9C005 99 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 NEK6Q9HC98 313 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 BPIFA1Q9NP55 256 aa12.11□□□□□ -0.47
PCM1-203ENST00000517545 FAM105AQ9NUU6 356 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms