RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 OR13C4Q8NGS5 318 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 PPP4R1Q8TF05 950 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 NACC2Q96BF6 587 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 HAUS1Q96CS2 278 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 QKIQ96PU8 341 aaKnown RBP eCLIP15.2■□□□□ 0.02
LMNA-223ENST00000515459 CHRNA10Q9GZZ6 450 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 GBA3Q9H227 469 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 NOVA2Q9UNW9 492 aaKnown RBP15.2■□□□□ 0.02
LMNA-223ENST00000515459 ICKQ9UPZ9 632 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 OSGIN2Q9Y236 505 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.2■□□□□ 0.029e-28■■□□□ 11.6
LMNA-223ENST00000515459 DOCK10Q96BY6 2186 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 CSMD1Q96PZ7 3565 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 ARHGAP10A1A4S6 786 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 HACD1B0YJ81 288 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 EDN3P14138 238 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 UGT2B7P16662 529 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 POU3F2P20265 443 aaPredicted RBP15.19■□□□□ 0.02
LMNA-223ENST00000515459 COMTP21964 271 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 SHMT2P34897 504 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 FOXL2P58012 376 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 TMPRSS15P98073 1019 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 ZIC1Q15915 447 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 HIF1AQ16665 826 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 TFDP3Q5H9I0 405 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 ITPRIPL1Q6GPH6 555 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 TRIM73Q86UV7 250 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 ZNF655Q8N720 491 aaPredicted RBP15.19■□□□□ 0.02
LMNA-223ENST00000515459 GRHL3Q8TE85 626 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 COG1Q8WTW3 980 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 OR2A14Q96R47 310 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 C19orf43Q9BQ61 176 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 APOL2Q9BQE5 337 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 NDC1Q9BTX1 674 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 IRAK4Q9NWZ3 460 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 ZDHHC3Q9NYG2 299 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 CSAG2Q9Y5P2 127 aa15.19■□□□□ 0.02
LMNA-223ENST00000515459 IGLV3-16A0A075B6K0 115 aa15.18■□□□□ 0.02
LMNA-223ENST00000515459 E2F3O00716 465 aa15.18■□□□□ 0.02
LMNA-223ENST00000515459 PSTPIP1O43586 416 aa15.18■□□□□ 0.02
LMNA-223ENST00000515459 ADRA1AP35348 466 aa15.18■□□□□ 0.02
LMNA-223ENST00000515459 TSFMP43897 325 aaKnown RBP15.18■□□□□ 0.02
LMNA-223ENST00000515459 OLIG2Q13516 323 aa15.18■□□□□ 0.02
LMNA-223ENST00000515459 GPR33Q49SQ1 333 aa15.18■□□□□ 0.02
LMNA-223ENST00000515459 IRAK1BP1Q5VVH5 260 aa15.18■□□□□ 0.02
LMNA-223ENST00000515459 PRAMEF13Q5VWM6 474 aa15.18■□□□□ 0.02
LMNA-223ENST00000515459 CAVIN1Q6NZI2 390 aaKnown RBP15.18■□□□□ 0.02
LMNA-223ENST00000515459 IGFL2Q6UWQ7 119 aa15.18■□□□□ 0.02
LMNA-223ENST00000515459 UNC5AQ6ZN44 842 aa15.18■□□□□ 0.02
LMNA-223ENST00000515459 OR8K1Q8NGG5 319 aa15.18■□□□□ 0.02
LMNA-223ENST00000515459 DNAJB14Q8TBM8 379 aa15.18■□□□□ 0.02
LMNA-223ENST00000515459 FAR1Q8WVX9 515 aa15.18■□□□□ 0.02
LMNA-223ENST00000515459 GORASP1Q9BQQ3 440 aa15.18■□□□□ 0.02
LMNA-223ENST00000515459 IFNKQ9P0W0 207 aa15.18■□□□□ 0.02
LMNA-223ENST00000515459 AAR2Q9Y312 384 aaKnown RBP15.18■□□□□ 0.02
LMNA-223ENST00000515459 hCG_1818297A0A087WSY0 165 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 A0A0J9YY10 115 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 ZG16O60844 167 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 CTSBP07858 339 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 CHRM5P08912 532 aaPredicted RBP15.17■□□□□ 0.02
LMNA-223ENST00000515459 GSTM1P09488 218 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 PRF1P14222 555 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 MMP11P24347 488 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 ACRV1P26436 265 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 MC4RP32245 332 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 ZNF140P52738 457 aaPredicted RBP15.17■□□□□ 0.02
LMNA-223ENST00000515459 GSTM4Q03013 218 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 CDC16Q13042 620 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 MSLNQ13421 630 aaPredicted RBP15.17■□□□□ 0.02
LMNA-223ENST00000515459 ZNF169Q14929 603 aaPredicted RBP15.17■□□□□ 0.02
LMNA-223ENST00000515459 AGAP7PQ5VUJ5 663 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 B3GNTL1Q67FW5 361 aaPredicted RBP15.17■□□□□ 0.02
LMNA-223ENST00000515459 SP5Q6BEB4 398 aaPredicted RBP15.17■□□□□ 0.02
LMNA-223ENST00000515459 TMEM151BQ8IW70 566 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 OR5AR1Q8NGP9 310 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 CNDP1Q96KN2 507 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 AGAP4Q96P64 663 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 DNAJC7Q99615 494 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 UNKQ9C0B0 810 aaKnown RBP15.17■□□□□ 0.02
LMNA-223ENST00000515459 SLC6A20Q9NP91 592 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 SPTLC3Q9NUV7 552 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 ZNHIT6Q9NWK9 470 aaKnown RBP15.17■□□□□ 0.02
LMNA-223ENST00000515459 CDC23Q9UJX2 597 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 FBXL4Q9UKA2 621 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 PLCL2Q9UPR0 1127 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 ASF1AQ9Y294 204 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 SNRNP200O75643 2136 aaKnown RBP15.17■□□□□ 0.02
LMNA-223ENST00000515459 ZGRF1Q86YA3 2104 aa15.17■□□□□ 0.02
LMNA-223ENST00000515459 A0A1B0GUH1 482 aa15.16■□□□□ 0.02
LMNA-223ENST00000515459 GOLGA6L19H0YKK7 550 aa15.16■□□□□ 0.02
LMNA-223ENST00000515459 CCL22O00626 93 aa15.16■□□□□ 0.02
LMNA-223ENST00000515459 ALOX12BO75342 701 aa15.16■□□□□ 0.02
LMNA-223ENST00000515459 ZRANB2O95218 330 aaKnown RBP eCLIP15.16■□□□□ 0.02
LMNA-223ENST00000515459 ALAS2P22557 587 aa15.16■□□□□ 0.02
LMNA-223ENST00000515459 RBL1P28749 1068 aa15.16■□□□□ 0.02
LMNA-223ENST00000515459 CDKN1CP49918 316 aaPredicted RBP15.16■□□□□ 0.02
LMNA-223ENST00000515459 PRPSAP1Q14558 356 aa15.16■□□□□ 0.02
LMNA-223ENST00000515459 SERPINA9Q86WD7 417 aa15.16■□□□□ 0.02
LMNA-223ENST00000515459 CCDC50Q8IVM0 306 aa15.16■□□□□ 0.02
LMNA-223ENST00000515459 DNAJC22Q8N4W6 341 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms