RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 C1QAP02745 245 aa19.66■□□□□ 0.74
USP53-208ENST00000514305 ITGA2BP08514 1039 aa19.66■□□□□ 0.74
USP53-208ENST00000514305 STMN1P16949 149 aa19.66■□□□□ 0.74
USP53-208ENST00000514305 SAT1P21673 171 aa19.66■□□□□ 0.74
USP53-208ENST00000514305 RPL10P27635 214 aaKnown RBP19.66■□□□□ 0.74
USP53-208ENST00000514305 MLLT3P42568 568 aaPredicted RBP19.66■□□□□ 0.74
USP53-208ENST00000514305 C19orf57Q0VDD7 668 aa19.66■□□□□ 0.74
USP53-208ENST00000514305 NEK10Q6ZWH5 1172 aa19.66■□□□□ 0.74
USP53-208ENST00000514305 NKAPQ8N5F7 415 aaKnown RBP19.66■□□□□ 0.74
USP53-208ENST00000514305 MAGEC3Q8TD91 643 aa19.66■□□□□ 0.74
USP53-208ENST00000514305 SKA2Q8WVK7 121 aaPredicted RBP19.66■□□□□ 0.74
USP53-208ENST00000514305 ZFPM2Q8WW38 1151 aa19.66■□□□□ 0.74
USP53-208ENST00000514305 NDNQ99608 321 aa19.66■□□□□ 0.74
USP53-208ENST00000514305 GPR21Q99679 349 aa19.66■□□□□ 0.74
USP53-208ENST00000514305 ROPN1BQ9BZX4 212 aaPredicted RBP19.66■□□□□ 0.74
USP53-208ENST00000514305 ROPN1Q9HAT0 212 aaPredicted RBP19.66■□□□□ 0.74
USP53-208ENST00000514305 PRDM8Q9NQV8 689 aa19.66■□□□□ 0.74
USP53-208ENST00000514305 POT1Q9NUX5 634 aa19.66■□□□□ 0.74
USP53-208ENST00000514305 SLC17A6Q9P2U8 582 aa19.66■□□□□ 0.74
USP53-208ENST00000514305 SLC39A10Q9ULF5 831 aa19.66■□□□□ 0.74
USP53-208ENST00000514305 PABPN1LA6NDY0 278 aaKnown RBP19.65■□□□□ 0.74
USP53-208ENST00000514305 PRR19A6NJB7 356 aa19.65■□□□□ 0.74
USP53-208ENST00000514305 TMX2-CTNND1H3BSU7 103 aa19.65■□□□□ 0.74
USP53-208ENST00000514305 NTN3O00634 580 aaPredicted RBP19.65■□□□□ 0.74
USP53-208ENST00000514305 VIPP01282 170 aa19.65■□□□□ 0.74
USP53-208ENST00000514305 SNRPAP09012 282 aaKnown RBP19.65■□□□□ 0.74
USP53-208ENST00000514305 NUDT17P0C025 328 aa19.65■□□□□ 0.74
USP53-208ENST00000514305 XRCC1P18887 633 aaPredicted RBP19.65■□□□□ 0.74
USP53-208ENST00000514305 CRABP2P29373 138 aa19.65■□□□□ 0.74
USP53-208ENST00000514305 CLCN7P51798 805 aa19.65■□□□□ 0.74
USP53-208ENST00000514305 IL2P60568 153 aa19.65■□□□□ 0.74
USP53-208ENST00000514305 SEPT7Q16181 437 aaKnown RBP19.65■□□□□ 0.74
USP53-208ENST00000514305 C14orf28Q4W4Y0 310 aa19.65■□□□□ 0.74
USP53-208ENST00000514305 SLC22A15Q8IZD6 547 aa19.65■□□□□ 0.74
USP53-208ENST00000514305 GPR156Q8NFN8 814 aa19.65■□□□□ 0.74
USP53-208ENST00000514305 NAT14Q8WUY8 206 aa19.65■□□□□ 0.74
USP53-208ENST00000514305 LIN37Q96GY3 246 aaPredicted RBP19.65■□□□□ 0.74
USP53-208ENST00000514305 C12orf66Q96MD2 445 aa19.65■□□□□ 0.74
USP53-208ENST00000514305 STRADBQ9C0K7 418 aa19.65■□□□□ 0.74
USP53-208ENST00000514305 WWP1Q9H0M0 922 aa19.65■□□□□ 0.74
USP53-208ENST00000514305 PSMC3IPQ9P2W1 217 aaPredicted RBP19.65■□□□□ 0.74
USP53-208ENST00000514305 TLK1Q9UKI8 766 aa19.65■□□□□ 0.74
USP53-208ENST00000514305 A0A1W2PNU3 283 aaPredicted RBP19.64■□□□□ 0.73
USP53-208ENST00000514305 PIAS1O75925 651 aa19.64■□□□□ 0.73
USP53-208ENST00000514305 TNFSF15O95150 251 aa19.64■□□□□ 0.73
USP53-208ENST00000514305 PRB1P04280 392 aa19.64■□□□□ 0.73
USP53-208ENST00000514305 RPLP0P05388 317 aaKnown RBP19.64■□□□□ 0.73
USP53-208ENST00000514305 FDXRP22570 491 aa19.64■□□□□ 0.73
USP53-208ENST00000514305 EIF3IQ13347 325 aaKnown RBP19.64■□□□□ 0.73
USP53-208ENST00000514305 EFTUD2Q15029 972 aaKnown RBP eCLIP19.64■□□□□ 0.73
USP53-208ENST00000514305 RBM20Q5T481 1227 aaKnown RBP19.64■□□□□ 0.73
USP53-208ENST00000514305 CAPRIN2Q6IMN6 1127 aaKnown RBP19.64■□□□□ 0.73
USP53-208ENST00000514305 FAM83HQ6ZRV2 1179 aaPredicted RBP19.64■□□□□ 0.73
USP53-208ENST00000514305 RAPH1Q70E73 1250 aa19.64■□□□□ 0.73
USP53-208ENST00000514305 MYO1HQ8N1T3 1032 aa19.64■□□□□ 0.73
USP53-208ENST00000514305 RIBC1Q8N443 379 aaPredicted RBP19.64■□□□□ 0.73
USP53-208ENST00000514305 SFRP1Q8N474 314 aa19.64■□□□□ 0.73
USP53-208ENST00000514305 SIDT2Q8NBJ9 832 aaKnown RBP19.64■□□□□ 0.73
USP53-208ENST00000514305 TFGQ92734 400 aaPredicted RBP19.64■□□□□ 0.73
USP53-208ENST00000514305 MCMBPQ9BTE3 642 aa19.64■□□□□ 0.73
USP53-208ENST00000514305 OR52A5Q9H2C5 316 aa19.64■□□□□ 0.73
USP53-208ENST00000514305 MVB12BQ9H7P6 319 aa19.64■□□□□ 0.73
USP53-208ENST00000514305 CPNE5Q9HCH3 593 aa19.64■□□□□ 0.73
USP53-208ENST00000514305 POLG2Q9UHN1 485 aa19.64■□□□□ 0.73
USP53-208ENST00000514305 PSMD13Q9UNM6 376 aa19.64■□□□□ 0.73
USP53-208ENST00000514305 MTO1Q9Y2Z2 717 aaKnown RBP19.64■□□□□ 0.73
USP53-208ENST00000514305 ST14Q9Y5Y6 855 aa19.64■□□□□ 0.73
USP53-208ENST00000514305 RHPN2P1A8MT19 583 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 CDRT15L2A8MXV6 281 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 D6RAR5 112 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 ERVH48-1M5A8F1 160 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 CASC3O15234 703 aaKnown RBP19.63■□□□□ 0.73
USP53-208ENST00000514305 NUDT21O43809 227 aaKnown RBP19.63■□□□□ 0.73
USP53-208ENST00000514305 CDH16O75309 829 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 MPC1LP0DKB6 136 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 PNLIPP16233 465 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 GLB1P16278 677 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 CCNFP41002 786 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 FASLGP48023 281 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 SERPINB8P50452 374 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 PDX1P52945 283 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 RAB10P61026 200 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 CCL7P80098 99 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 RASA2Q15283 850 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 ZNF658BQ4V348 819 aaPredicted RBP19.63■□□□□ 0.73
USP53-208ENST00000514305 TAF1BQ53T94 588 aaPredicted RBP19.63■□□□□ 0.73
USP53-208ENST00000514305 ARHGAP40Q5TG30 622 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 MROH9Q5TGP6 573 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 UNC5DQ6UXZ4 953 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 TDRPQ86YL5 185 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 NAGSQ8N159 534 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 RAB42Q8N4Z0 105 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 LKAAEAR1Q8TD35 194 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 CD200R1Q8TD46 325 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 FAM136AQ96C01 138 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 PRR11Q96HE9 360 aaPredicted RBP19.63■□□□□ 0.73
USP53-208ENST00000514305 CABS1Q96KC9 395 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 TMEM74Q96NL1 305 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 GPAMQ9HCL2 828 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 CPNE7Q9UBL6 633 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms