RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 MICALCLQ6ZW33 695 aa19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 COG1Q8WTW3 980 aa19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 TFB1MQ8WVM0 346 aaKnown RBP19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.57■□□□□ 0.721e-7■■■□□ 14.6
SQSTM1-215ENST00000514093 MAGEB10Q96LZ2 347 aaPredicted RBP19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 OR2A14Q96R47 310 aa19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 NDC1Q9BTX1 674 aa19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 EPS8L2Q9H6S3 715 aa19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 MVB12BQ9H7P6 319 aa19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 CRLS1Q9UJA2 301 aa19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 KLF2Q9Y5W3 355 aaPredicted RBP19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 PCM1Q15154 2024 aa19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 ZNF487B1APH4 448 aa19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 HTR1EP28566 365 aa19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 OTUD4Q01804 1114 aaKnown RBP19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 TYRO3Q06418 890 aa19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 BOP1Q14137 746 aaKnown RBP19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 FIGNQ5HY92 759 aa19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 TLDC1Q6P9B6 456 aa19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 KIRREL2Q6UWL6 708 aa19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 UNC5AQ6ZN44 842 aa19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 PID1Q7Z2X4 250 aa19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 ZNF567Q8N184 647 aa19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 NXPE1Q8N323 547 aa19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 BCORP1Q8N888 145 aa19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 OR1N1Q8NGS0 311 aa19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 TFGQ92734 400 aaPredicted RBP19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 SYN2Q92777 582 aaPredicted RBP19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 THOC3Q96J01 351 aaKnown RBP19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 FCRL5Q96RD9 977 aa19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 LHPPQ9H008 270 aa19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 NENFQ9UMX5 172 aa19.56■□□□□ 0.72
SQSTM1-215ENST00000514093 C17orf113A0A1B0GUU1 675 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 KLHL18O94889 574 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 H2AFZP0C0S5 128 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 RALBP11234 206 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 TNNT1P13805 278 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 ATP1B2P14415 290 aaPredicted RBP19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 PECAM1P16284 738 aaPredicted RBP19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 ITGAXP20702 1163 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 PTGER4P35408 488 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 XIAPP98170 497 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 SRSF11Q05519 484 aaKnown RBP19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 Q0VFX4 171 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 NUP210LQ5VU65 1888 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 TTLL10Q6ZVT0 673 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 H2AFVQ71UI9 128 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 MRGPRGQ86SM5 289 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 FAM20CQ8IXL6 584 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 DNAJC22Q8N4W6 341 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 OR5AR1Q8NGP9 310 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 CTNNBL1Q8WYA6 563 aaPredicted RBP19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 CCDC120Q96HB5 630 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 MESP1Q9BRJ9 268 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 SOX17Q9H6I2 414 aaPredicted RBP19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 HS3ST3B1Q9Y662 390 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 TACC2O95359 2948 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 DCHS2Q6V1P9 2916 aa19.55■□□□□ 0.72
SQSTM1-215ENST00000514093 TRGV8A0A0C4DH27 118 aa19.54■□□□□ 0.72
SQSTM1-215ENST00000514093 C2orf81A6NN90 581 aa19.54■□□□□ 0.72
SQSTM1-215ENST00000514093 COX6B1P14854 86 aa19.54■□□□□ 0.72
SQSTM1-215ENST00000514093 CD151P48509 253 aa19.54■□□□□ 0.72
SQSTM1-215ENST00000514093 ZNF658BQ4V348 819 aaPredicted RBP19.54■□□□□ 0.72
SQSTM1-215ENST00000514093 ZNF324BQ6AW86 544 aaPredicted RBP19.54■□□□□ 0.72
SQSTM1-215ENST00000514093 FCRL6Q6DN72 434 aa19.54■□□□□ 0.72
SQSTM1-215ENST00000514093 MFSD7Q6UXD7 560 aa19.54■□□□□ 0.72
SQSTM1-215ENST00000514093 VSIG1Q86XK7 387 aa19.54■□□□□ 0.72
SQSTM1-215ENST00000514093 OR13C4Q8NGS5 318 aa19.54■□□□□ 0.72
SQSTM1-215ENST00000514093 FLVCR1-AS1Q8TAF5 88 aa19.54■□□□□ 0.72
SQSTM1-215ENST00000514093 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.54■□□□□ 0.72
SQSTM1-215ENST00000514093 TAAR6Q96RI8 345 aa19.54■□□□□ 0.72
SQSTM1-215ENST00000514093 COPS8Q99627 209 aa19.54■□□□□ 0.72
SQSTM1-215ENST00000514093 FICDQ9BVA6 458 aa19.54■□□□□ 0.72
SQSTM1-215ENST00000514093 FSD1LQ9BXM9 530 aa19.54■□□□□ 0.72
SQSTM1-215ENST00000514093 PLCL2Q9UPR0 1127 aa19.54■□□□□ 0.72
SQSTM1-215ENST00000514093 ITPR3Q14573 2671 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 CCL22O00626 93 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 PCDH17O14917 1159 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 SERPINC1P01008 464 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 CHRM5P08912 532 aaPredicted RBP19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 CDKN1CP49918 316 aaPredicted RBP19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 TDGF1P3P51864 188 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 MPP3Q13368 585 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 OLIG2Q13516 323 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 TAF1AQ15573 450 aaPredicted RBP19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 NKG7Q16617 165 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 ODF2Q5BJF6 829 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 ISLR2Q6UXK2 745 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 GFRALQ6UXV0 394 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 OVCH1Q7RTY7 1134 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 NACC2Q96BF6 587 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 SPSB2Q99619 263 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 APOL2Q9BQE5 337 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 NAT10Q9H0A0 1025 aaKnown RBP19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 PLAGL1Q9UM63 463 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 KLHL20Q9Y2M5 609 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 TDRKHQ9Y2W6 561 aaKnown RBP19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 CCDC168Q8NDH2 2452 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 PKDREJQ9NTG1 2253 aa19.53■□□□□ 0.72
SQSTM1-215ENST00000514093 A0A0J9YY10 115 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms