RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 KPNA5O15131 536 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 POLR1CO15160 346 aaPredicted RBP13.55□□□□□ -0.24
DDX41-212ENST00000511040 HAUS5O94927 633 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 PVRP15151 417 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 FOLR1P15328 257 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 NELFEP18615 380 aaKnown RBP13.55□□□□□ -0.24
DDX41-212ENST00000511040 CDH3P22223 829 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 SHMT2P34897 504 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 CARSP49589 748 aaKnown RBP13.55□□□□□ -0.24
DDX41-212ENST00000511040 ADARP55265 1226 aaKnown RBP13.55□□□□□ -0.24
DDX41-212ENST00000511040 CKAP4Q07065 602 aaKnown RBP13.55□□□□□ -0.24
DDX41-212ENST00000511040 TRADDQ15628 312 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 ACSBG2Q5FVE4 666 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 PLEKHS1Q5SXH7 462 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 BROXQ5VW32 411 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 TRIM73Q86UV7 250 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 TAX1BP1Q86VP1 789 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 SIDT2Q8NBJ9 832 aaKnown RBP13.55□□□□□ -0.24
DDX41-212ENST00000511040 TRIM44Q96DX7 344 aaPredicted RBP13.55□□□□□ -0.24
DDX41-212ENST00000511040 CERS2Q96G23 380 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 SLC41A2Q96JW4 573 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 IL17FQ96PD4 163 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 CD180Q99467 661 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 NDNQ99608 321 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 SLC30A3Q99726 388 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 NAT9Q9BTE0 207 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 ASPSCR1Q9BZE9 553 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 CCDC68Q9H2F9 335 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 SPHK1Q9NYA1 384 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 POLG2Q9UHN1 485 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 PKD1L2Q7Z442 2459 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 SDK2Q58EX2 2172 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 BAHCC1Q9P281 2608 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 C2orf74A8MZ97 194 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 CHRM5P08912 532 aaPredicted RBP13.54□□□□□ -0.24
DDX41-212ENST00000511040 LIPCP11150 499 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 ZNF28P17035 718 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 GABRB3P28472 473 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 PRDX3P30048 256 aaKnown RBP13.54□□□□□ -0.24
DDX41-212ENST00000511040 CLCN7P51798 805 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 CXADRP78310 365 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 SLC7A5Q01650 507 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 CALCOCO2Q13137 446 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 CUL1Q13616 776 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 CCSMST1Q4G0I0 132 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 DUPD1Q68J44 220 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 UNC5DQ6UXZ4 953 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 CEACAM20Q6UY09 585 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 CAPN12Q6ZSI9 719 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 ZNF572Q7Z3I7 529 aaPredicted RBP13.54□□□□□ -0.24
DDX41-212ENST00000511040 DCUN1D3Q8IWE4 304 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 LMNTD2Q8IXW0 634 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 C2CD4AQ8NCU7 369 aaPredicted RBP13.54□□□□□ -0.24
DDX41-212ENST00000511040 BBOF1Q8ND07 529 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 FBXO36Q8NEA4 188 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 GIMAP7Q8NHV1 300 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 B3GNT4Q9C0J1 378 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 SOHLH2Q9NX45 425 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 GRHL1Q9NZI5 618 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 WHRNQ9P202 907 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 SEMA5BQ9P283 1151 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 MED16Q9Y2X0 877 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 PCDHB11Q9Y5F2 797 aa13.54□□□□□ -0.24
DDX41-212ENST00000511040 DSPP15924 2871 aaKnown RBP13.53□□□□□ -0.24
DDX41-212ENST00000511040 TEX51A0A1B0GUA7 166 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 PIPSLA2A3N6 862 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 STMND1H3BQB6 276 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 MATN2O00339 956 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 STK17BO94768 372 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 ZBTB11O95625 1053 aaPredicted RBP13.53□□□□□ -0.24
DDX41-212ENST00000511040 RPN2P04844 631 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 ST6GAL1P15907 406 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 UGT2B7P16662 529 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 CD82P27701 267 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 PKLRP30613 574 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 DEKP35659 375 aaKnown RBP13.53□□□□□ -0.24
DDX41-212ENST00000511040 HSD11B2P80365 405 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 TUBB3Q13509 450 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 GRB7Q14451 532 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 GBX1Q14549 363 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 GPR19Q15760 415 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 KYNUQ16719 465 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 WHAMMP3Q1A5X7 153 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 TEDDM1Q5T9Z0 273 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 STEAP4Q687X5 459 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 RASGRP3Q8IV61 690 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 FAM20CQ8IXL6 584 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 ZBED8Q8IZ13 594 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 LRRC39Q96DD0 335 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 TEFMQ96QE5 360 aaKnown RBP13.53□□□□□ -0.24
DDX41-212ENST00000511040 OR2A14Q96R47 310 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 GPR21Q99679 349 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 AARSD1Q9BTE6 412 aaKnown RBP13.53□□□□□ -0.24
DDX41-212ENST00000511040 SAYSD1Q9NPB0 183 aa13.53□□□□□ -0.24
DDX41-212ENST00000511040 UTP11Q9Y3A2 253 aaKnown RBP13.53□□□□□ -0.24
DDX41-212ENST00000511040 AHCTF1Q8WYP5 2266 aa13.52□□□□□ -0.24
DDX41-212ENST00000511040 ESYT3A0FGR9 886 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 ISM1B1AKI9 464 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 E7ESA3 106 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 NDC80O14777 642 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms