RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 ALG1LQ6GMV1 187 aa10.32□□□□□ -0.76
SNF8-207ENST00000509995 PODNL1Q6PEZ8 512 aa10.32□□□□□ -0.76
SNF8-207ENST00000509995 CNSTQ6PJW8 725 aa10.32□□□□□ -0.76
SNF8-207ENST00000509995 RIPOR1Q6ZS17 1223 aa10.32□□□□□ -0.76
SNF8-207ENST00000509995 CCDC71Q8IV32 467 aaPredicted RBP10.32□□□□□ -0.76
SNF8-207ENST00000509995 LCN9Q8WX39 176 aa10.32□□□□□ -0.76
SNF8-207ENST00000509995 DLG3Q92796 817 aa10.32□□□□□ -0.76
SNF8-207ENST00000509995 VPS35Q96QK1 796 aa10.32□□□□□ -0.76
SNF8-207ENST00000509995 EIF3CQ99613 913 aaKnown RBP10.32□□□□□ -0.76
SNF8-207ENST00000509995 SELENOOQ9BVL4 669 aa10.32□□□□□ -0.76
SNF8-207ENST00000509995 POLR1EQ9GZS1 481 aaKnown RBP10.32□□□□□ -0.76
SNF8-207ENST00000509995 CHRNA10Q9GZZ6 450 aa10.32□□□□□ -0.76
SNF8-207ENST00000509995 DMRT3Q9NQL9 472 aa10.32□□□□□ -0.76
SNF8-207ENST00000509995 MKL2Q9ULH7 1088 aa10.32□□□□□ -0.76
SNF8-207ENST00000509995 MPDZO75970 2070 aa10.32□□□□□ -0.76
SNF8-207ENST00000509995 GTPBP10A4D1E9 387 aaKnown RBP10.31□□□□□ -0.76
SNF8-207ENST00000509995 VSTM2BA6NLU5 285 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 C2orf74A8MZ97 194 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 WFS1O76024 890 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 F13A1P00488 732 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 CA4P22748 312 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 PBLDP30039 288 aaPredicted RBP10.31□□□□□ -0.76
SNF8-207ENST00000509995 CARSP49589 748 aaKnown RBP10.31□□□□□ -0.76
SNF8-207ENST00000509995 RAB28P51157 221 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 CDH6P55285 790 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 DCAF7P61962 342 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 KRT85P78386 507 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 DSC2Q02487 901 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 ZNF33BQ06732 778 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 ITKQ08881 620 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 QPCTQ16769 361 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 TFDP3Q5H9I0 405 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 Q5PR19 223 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 SPESP1Q6UW49 350 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 ARSKQ6UWY0 536 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 TTLL10Q6ZVT0 673 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 NEK10Q6ZWH5 1172 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 NDUFAF7Q7L592 441 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 ATPAF2Q8N5M1 289 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.31□□□□□ -0.76
SNF8-207ENST00000509995 ACVR1CQ8NER5 493 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 SLC30A5Q8TAD4 765 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 FAM57AQ8TBR7 257 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.31□□□□□ -0.76
SNF8-207ENST00000509995 CCDC34Q96HJ3 373 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 SEC16BQ96JE7 1060 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 TTC25Q96NG3 672 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 KCTD15Q96SI1 283 aaPredicted RBP10.31□□□□□ -0.76
SNF8-207ENST00000509995 TUBGCP2Q9BSJ2 902 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 GOLPH3LQ9H4A5 285 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 PCDH9Q9HC56 1237 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 BEX4Q9NWD9 120 aaPredicted RBP10.31□□□□□ -0.76
SNF8-207ENST00000509995 CRIM1Q9NZV1 1036 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 COLEC10Q9Y6Z7 277 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 SCN2AQ99250 2005 aa10.31□□□□□ -0.76
SNF8-207ENST00000509995 A0A1W2PQ72 361 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 ANKRD66B4E2M5 251 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 ARHGEF9O43307 516 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 MT-CYBP00156 380 aaPredicted RBP10.3□□□□□ -0.76
SNF8-207ENST00000509995 CYP1A1P04798 512 aaPredicted RBP10.3□□□□□ -0.76
SNF8-207ENST00000509995 SLC35G4P0C7Q5 338 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 ITGAMP11215 1152 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 EEF1DP29692 281 aaKnown RBP10.3□□□□□ -0.76
SNF8-207ENST00000509995 KIR2DL3P43628 341 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 KLC1Q07866 573 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 PTP4A2Q12974 167 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 DPYSQ14117 519 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 KRT33BQ14525 404 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 ATP13A4Q4VNC1 1196 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 PPP6R3Q5H9R7 873 aaPredicted RBP10.3□□□□□ -0.76
SNF8-207ENST00000509995 TXNRD3NBQ6F5E7 133 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 KLHL10Q6JEL2 608 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 NLRP9Q7RTR0 991 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 TRIM73Q86UV7 250 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 TEX26Q8N6G2 289 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 BEND7Q8N7W2 519 aaPredicted RBP10.3□□□□□ -0.76
SNF8-207ENST00000509995 GDAP1Q8TB36 358 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.3□□□□□ -0.76
SNF8-207ENST00000509995 RMDN2Q96LZ7 410 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 NRTNQ99748 197 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 CNPY3Q9BT09 278 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 HES7Q9BYE0 225 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 KLHL1Q9NR64 748 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 RAD18Q9NS91 495 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 TAS2R14Q9NYV8 317 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 ACTR10Q9NZ32 417 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 DNMT3AQ9Y6K1 912 aaPredicted RBP10.3□□□□□ -0.76
SNF8-207ENST00000509995 MEGF8Q7Z7M0 2845 aa10.3□□□□□ -0.76
SNF8-207ENST00000509995 BICDL2A1A5D9 508 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 OR2AG2A6NM03 316 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 SIGLEC16A6NMB1 481 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 IFNA2P01563 188 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 SLC4A1P02730 911 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 ZSCAN22P10073 491 aaPredicted RBP10.29□□□□□ -0.76
SNF8-207ENST00000509995 PTGS2P35354 604 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 ARSEP51690 589 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 ARSFP54793 590 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 CBLBQ13191 982 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 SNTB1Q13884 538 aaKnown RBP10.29□□□□□ -0.76
SNF8-207ENST00000509995 ATP13A5Q4VNC0 1218 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms