RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 PLEKHM1Q9Y4G2 1056 aa8.42□□□□□ -1.06
USP46-207ENST00000508499 OARD1Q9Y530 152 aa8.42□□□□□ -1.06
USP46-207ENST00000508499 ZNF292O60281 2723 aa8.42□□□□□ -1.06
USP46-207ENST00000508499 DNAH14Q0VDD8 3507 aa8.42□□□□□ -1.06
USP46-207ENST00000508499 LILRA5A6NI73 299 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 SYCE1LA8MT33 242 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 ZWINTO95229 277 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 EML2O95834 649 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 CATP04040 527 aaKnown RBP8.41□□□□□ -1.06
USP46-207ENST00000508499 GLB1P16278 677 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 ITGB6P18564 788 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 CYP2A7P20853 494 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 SAT1P21673 171 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 RPL10P27635 214 aaKnown RBP8.41□□□□□ -1.06
USP46-207ENST00000508499 PBLDP30039 288 aaPredicted RBP8.41□□□□□ -1.06
USP46-207ENST00000508499 GGT5P36269 586 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 SLC19A1P41440 591 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 ETV4P43268 484 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 GPR3P46089 330 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 PREPP48147 710 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 ATXN3P54252 364 aaPredicted RBP8.41□□□□□ -1.06
USP46-207ENST00000508499 EPHA4P54764 986 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 SPEM2Q0P670 501 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 GPS2Q13227 327 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 SQSTM1Q13501 440 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 CSHL1Q14406 222 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 GRB7Q14451 532 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 TGFBIQ15582 683 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 CLPPQ16740 277 aaPredicted RBP8.41□□□□□ -1.06
USP46-207ENST00000508499 C14orf28Q4W4Y0 310 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 PPM1JQ5JR12 505 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 SRRM1Q8IYB3 904 aaKnown RBP8.41□□□□□ -1.06
USP46-207ENST00000508499 KLHDC8AQ8IYD2 350 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 PLD6Q8N2A8 252 aaKnown RBP8.41□□□□□ -1.06
USP46-207ENST00000508499 TCAIMQ8N3R3 496 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 GOLGA6L1Q8N7Z2 621 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 PDPRQ8NCN5 879 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 FAM46DQ8NEK8 389 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 MAPK15Q8TD08 544 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 MCOLN3Q8TDD5 553 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 ZDHHC1Q8WTX9 485 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 DLG3Q92796 817 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 PTERQ96BW5 349 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 NXNL1Q96CM4 212 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 CCDC138Q96M89 665 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 C12orf66Q96MD2 445 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 TSNARE1Q96NA8 513 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 RAB33BQ9H082 229 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 OSGEPL1Q9H4B0 414 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 STN1Q9H668 368 aaKnown RBP8.41□□□□□ -1.06
USP46-207ENST00000508499 IL21RQ9HBE5 538 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 PARD6AQ9NPB6 346 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 TMEM9BQ9NQ34 198 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 PCMTD2Q9NV79 361 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 SCHIP1Q9P0W5 487 aaPredicted RBP8.41□□□□□ -1.06
USP46-207ENST00000508499 SPATA7Q9P0W8 599 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 CPNE7Q9UBL6 633 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 MID2Q9UJV3 735 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 PLLPQ9Y342 182 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 COL27A1Q8IZC6 1860 aaPredicted RBP8.41□□□□□ -1.06
USP46-207ENST00000508499 GPR179Q6PRD1 2367 aa8.41□□□□□ -1.06
USP46-207ENST00000508499 ASCC3Q8N3C0 2202 aaKnown RBP8.4□□□□□ -1.06
USP46-207ENST00000508499 LY6G6EA0A0G2JKS1 128 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 EME2A4GXA9 379 aaPredicted RBP8.4□□□□□ -1.06
USP46-207ENST00000508499 SMIM23A6NLE4 172 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 PDZK1P1A8MUH7 402 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 ARHGEF33A8MVX0 844 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 BTN3A1O00481 513 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 COPEO14579 308 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 PLIN3O60664 434 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 IPO13O94829 963 aaKnown RBP8.4□□□□□ -1.06
USP46-207ENST00000508499 FKBP9O95302 570 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 GP1BAP07359 652 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 DHRS4L1P0CG22 281 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 CKMT1AP12532 417 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 CD59P13987 128 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 MTHFD2P13995 350 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 TFEBP19484 476 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 RPIAP49247 311 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 IRF9Q00978 393 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 HHEXQ03014 270 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 PCDH1Q08174 1060 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 C1orf61Q13536 156 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 CYP2A13Q16696 494 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 PRAMEF14Q5SWL7 426 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 TCEAL6Q6IPX3 200 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 CDHR3Q6ZTQ4 885 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 UBE2R2Q712K3 238 aaPredicted RBP8.4□□□□□ -1.06
USP46-207ENST00000508499 PIWIL4Q7Z3Z4 852 aaKnown RBP8.4□□□□□ -1.06
USP46-207ENST00000508499 ARL14Q8N4G2 192 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 SLC37A2Q8TED4 501 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 DENND1AQ8TEH3 1009 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 UBTD2Q8WUN7 234 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 KCTD4Q8WVF5 259 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 ATL1Q8WXF7 558 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 NAT6Q93015 286 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 TCEAL3Q969E4 200 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 FAM136AQ96C01 138 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 CCDC126Q96EE4 140 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 EDEM2Q9BV94 578 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms