RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 POGLUT1Q8NBL1 392 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 NPEPL1Q8NDH3 523 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 SLAMF9Q96A28 289 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 PTERQ96BW5 349 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 DHX58Q96C10 678 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 SPDL1Q96EA4 605 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 SERINC2Q96SA4 455 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 CCDC106Q9BWC9 280 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 APOL6Q9BWW8 343 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 GOLPH3LQ9H4A5 285 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 HAO2Q9NYQ3 351 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 NKIRAS2Q9NYR9 191 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 B3GAT1Q9P2W7 334 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 DDX25Q9UHL0 483 aaKnown RBP2.62□□□□□ -1.99
GYPB-207ENST00000506679 ZDHHC2Q9UIJ5 367 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 ZHX1Q9UKY1 873 aaPredicted RBP2.62□□□□□ -1.99
GYPB-207ENST00000506679 C2CD2Q9Y426 696 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 TTLL3Q9Y4R7 772 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 PCDH11YQ9BZA8 1340 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 LOC101059948A0A1B0GTJ6 334 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 DNM1LO00429 736 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 UBE2CO00762 179 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 PTGESO14684 152 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 ATP6V0E1O15342 81 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 PRKRAO75569 313 aaKnown RBP2.61□□□□□ -1.99
GYPB-207ENST00000506679 PSMD10O75832 226 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 PLA2G4BP0C869 781 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 FAM157CP0CG43 387 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 PFKFB1P16118 471 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 CA4P22748 312 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 WNT5AP41221 380 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 SLC9A3P48764 834 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 CDH11P55287 796 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 TPD52P55327 224 aaPredicted RBP2.61□□□□□ -1.99
GYPB-207ENST00000506679 UBXN2AP68543 259 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 PRKCZQ05513 592 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 HSPB3Q12988 150 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 GPR17Q13304 367 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 ALCAMQ13740 583 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 CRY2Q49AN0 593 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 SYT14P1Q58G82 188 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 C9orf152Q5JTZ5 239 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 SPDYCQ5MJ68 293 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 ADAM5Q6NVV9 412 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 C15orf39Q6ZRI6 1047 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 RBPMS2Q6ZRY4 209 aaKnown RBP2.61□□□□□ -1.99
GYPB-207ENST00000506679 TMPRSS11BQ86T26 416 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 NUDT13Q86X67 352 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 COMMD2Q86X83 199 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 ZNF383Q8NA42 475 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 POMGNT2Q8NAT1 580 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 XXYLT1Q8NBI6 393 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 ATL1Q8WXF7 558 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 IRGQQ8WZA9 623 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 LINC00615Q96LM1 132 aaPredicted RBP2.61□□□□□ -1.99
GYPB-207ENST00000506679 LRRC3BQ96PB8 259 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 CENPOQ9BU64 300 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 TXLNGYQ9BZA5 131 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 NOL11Q9H8H0 719 aaKnown RBP2.61□□□□□ -1.99
GYPB-207ENST00000506679 A4GALTQ9NPC4 353 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 ZNF71Q9NQZ8 489 aaPredicted RBP2.61□□□□□ -1.99
GYPB-207ENST00000506679 SDR39U1Q9NRG7 319 aaPredicted RBP2.61□□□□□ -1.99
GYPB-207ENST00000506679 SERINC1Q9NRX5 453 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 ECHDC1Q9NTX5 307 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 DDX43Q9NXZ2 648 aaKnown RBP2.61□□□□□ -1.99
GYPB-207ENST00000506679 CLIC5Q9NZA1 410 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 FLRT3Q9NZU0 649 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 ABT1Q9ULW3 272 aaKnown RBP2.61□□□□□ -1.99
GYPB-207ENST00000506679 KCNJ14Q9UNX9 436 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 RABGAP1Q9Y3P9 1069 aa2.61□□□□□ -1.99
GYPB-207ENST00000506679 A0A087X002 238 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 TRBC2A0A5B9 178 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 PLOD2O00469 737 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 P4HA2O15460 535 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 SPRY1O43609 319 aaPredicted RBP2.6□□□□□ -1.99
GYPB-207ENST00000506679 ZG16O60844 167 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 SOCS5O75159 536 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 TRUB2O95900 331 aaKnown RBP2.6□□□□□ -1.99
GYPB-207ENST00000506679 RAB40ALP0C0E4 278 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 CEACAM1P13688 526 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 MPZP25189 248 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 CHRNB4P30926 498 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 CEACAM8P31997 349 aaPredicted RBP2.6□□□□□ -1.99
GYPB-207ENST00000506679 MTHFRP42898 656 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 PDX1P52945 283 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 DMPKQ09013 629 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 KYNUQ16719 465 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 CA9Q16790 459 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 ITPRIPL2Q3MIP1 535 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 ELFN2Q5R3F8 820 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 RPUSD3Q6P087 351 aaKnown RBP2.6□□□□□ -1.99
GYPB-207ENST00000506679 ARHGAP11AQ6P4F7 1023 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 WDSUB1Q8N9V3 476 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 TDRD5Q8NAT2 981 aaKnown RBP2.6□□□□□ -1.99
GYPB-207ENST00000506679 CCDC107Q8WV48 283 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 TEKT4Q8WW24 435 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 SSMEM1Q8WWF3 244 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 NXNL1Q96CM4 212 aa2.6□□□□□ -1.99
GYPB-207ENST00000506679 PGAP3Q96FM1 320 aaPredicted RBP2.6□□□□□ -1.99
GYPB-207ENST00000506679 LRR1Q96L50 414 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms