RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 CSE1LP55060 971 aaKnown RBP3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 ZNF628Q5EBL2 1059 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 FAM72AQ5TYM5 149 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 FAM72DQ6L9T8 149 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 Q6ZTC4 211 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 FAM72BQ86X60 149 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 TMEM139Q8IV31 216 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 ZNF843Q8N446 348 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 SLC4A11Q8NBS3 891 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 GRHL3Q8TE85 626 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 TMEM143Q96AN5 459 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 SEPHS2Q99611 448 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 Q9N2K0 584 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 MYNNQ9NPC7 610 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 PIH1D3Q9NQM4 214 aaKnown RBP3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 SERINC1Q9NRX5 453 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 ZNF701Q9NV72 531 aaPredicted RBP3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 ADPRHL2Q9NX46 363 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 C5AR2Q9P296 337 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 NFKBIL1Q9UBC1 381 aaPredicted RBP3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 LRWD1Q9UFC0 647 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 IL17BQ9UHF5 180 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 ZNF112Q9UJU3 913 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 RNF150Q9ULK6 438 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 TCF19Q9Y242 345 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 PCDH11YQ9BZA8 1340 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 IGLV9-49A0A0B4J1Y8 123 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 TRIM77I1YAP6 450 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 DNM1LO00429 736 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 CLIC2O15247 247 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 SLCO2B1O94956 709 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 CELF2O95319 508 aaKnown RBP3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 PIGNO95427 931 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 GGPS1O95749 300 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 CD48P09326 243 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 FRMD6-AS1P0C7T7 363 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 JAK1P23458 1154 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 SLC6A6P31641 620 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 CDKN1AP38936 164 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 MTHFRP42898 656 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 VWC2Q2TAL6 325 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 KLHDC8BQ8IXV7 354 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 ZNF383Q8NA42 475 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 NPEPL1Q8NDH3 523 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 OR6J1Q8NGC5 347 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 GRAPLQ8TC17 118 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 SNRNP27Q8WVK2 155 aaKnown RBP3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 SSMEM1Q8WWF3 244 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 SYN2Q92777 582 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 NSL1Q96IY1 281 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 ANKRD2Q9GZV1 360 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 RABEP2Q9H5N1 569 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 CCDC177Q9NQR7 707 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 STK26Q9P289 416 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 ZNF624Q9P2J8 865 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 ABT1Q9ULW3 272 aaKnown RBP3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 RIPK3Q9Y572 518 aa3.7□□□□□ -1.82
TOPBP1-204ENST00000505804 LINC01565O15544 149 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 NGFP01138 241 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 CENPBP07199 599 aaPredicted RBP3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 INHBAP08476 426 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 ERVK-10P10266 1014 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 HSPA8P11142 646 aaKnown RBP3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 CEACAM8P31997 349 aaPredicted RBP3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 PCGF2P35227 344 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 PDX1P52945 283 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 MAPK12P53778 367 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 B3GALT5-AS1P59052 145 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 PTPRCAPQ14761 206 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 ITPRIPL2Q3MIP1 535 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 SYT14P1Q58G82 188 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 ARMC4Q5T2S8 1044 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 KRT80Q6KB66 452 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 MFSD12Q6NUT3 480 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 RBPMS2Q6ZRY4 209 aaKnown RBP3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 ZBTB49Q6ZSB9 765 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 MFSD6Q6ZSS7 791 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 ARHGAP22Q7Z5H3 698 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 CENPVQ7Z7K6 275 aaPredicted RBP3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 TTC30BQ8N4P2 665 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 MAPKAPK5-AS1Q8N8E1 139 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 TRIM58Q8NG06 486 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 DHX58Q96C10 678 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 ZNF501Q96CX3 271 aaPredicted RBP3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 RMDN1Q96DB5 314 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 FBXO17Q96EF6 278 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 ARSGQ96EG1 525 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 CNDP2Q96KP4 475 aaKnown RBP3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 LAT2Q9GZY6 243 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 OR10A4Q9H209 315 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 SLC52A3Q9NQ40 469 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 DAPK2Q9UIK4 370 aa3.69□□□□□ -1.82
TOPBP1-204ENST00000505804 A0A0G2JLW4 131 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 A0A1W2PPQ1 181 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 NEMP2A6NFY4 417 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 BLOC1S5-TXNDC5H3BN57 136 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 PCDH7O60245 1069 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 RNASEH1O60930 286 aaKnown RBP3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 PRKRAO75569 313 aaKnown RBP3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 IGHV2-70P01814 119 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms