RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 GLB1L3Q8NCI6 653 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-208ENST00000504387 ARRDC4Q8NCT1 418 aa7.48□□□□□ -1.21
NEDD9-208ENST00000504387 FAM120BQ96EK7 910 aaKnown RBP7.48□□□□□ -1.21
NEDD9-208ENST00000504387 CCDC120Q96HB5 630 aa7.48□□□□□ -1.21
NEDD9-208ENST00000504387 REXO5Q96IC2 774 aaKnown RBP7.48□□□□□ -1.21
NEDD9-208ENST00000504387 ZNF300Q96RE9 604 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-208ENST00000504387 UGT2B28Q9BY64 529 aa7.48□□□□□ -1.21
NEDD9-208ENST00000504387 ABCB9Q9NP78 766 aa7.48□□□□□ -1.21
NEDD9-208ENST00000504387 CRTAC1Q9NQ79 661 aa7.48□□□□□ -1.21
NEDD9-208ENST00000504387 ABI2Q9NYB9 513 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-208ENST00000504387 RCOR3Q9P2K3 495 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-208ENST00000504387 MAGEL2Q9UJ55 1249 aa7.48□□□□□ -1.21
NEDD9-208ENST00000504387 GABRQQ9UN88 632 aa7.48□□□□□ -1.21
NEDD9-208ENST00000504387 TPRKBQ9Y3C4 175 aa7.48□□□□□ -1.21
NEDD9-208ENST00000504387 MCM3APO60318 1980 aa7.48□□□□□ -1.21
NEDD9-208ENST00000504387 LTBP1Q14766 1721 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 COL2A1P02458 1487 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-208ENST00000504387 ELOVL7A1L3X0 281 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 TRIM64BA6NI03 449 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 AGAP5A6NIR3 686 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 PCP4L1A6NKN8 68 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 C12orf71A8MTZ7 269 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 KMOO15229 486 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 NCAM2O15394 837 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 NTRK1P04629 796 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 STSP08842 583 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 SMIM10L2AP0DMW4 78 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 SMIM10L2BP0DMW5 78 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 UMPSP11172 480 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 DDX5P17844 614 aaKnown RBP7.47□□□□□ -1.21
NEDD9-208ENST00000504387 HTR1EP28566 365 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 FCGRTP55899 365 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 ERVPABLB-1P60509 514 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 PPP2R2BQ00005 443 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 IRF3Q14653 427 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 ABRAXAS2Q15018 415 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 CLPPQ16740 277 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-208ENST00000504387 TIGD6Q17RP2 521 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 DCAF4L1Q3SXM0 396 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 SIRPB2Q5JXA9 342 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 ZNF691Q5VV52 312 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 KANK2Q63ZY3 851 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 KIAA0930Q6ICG6 404 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-208ENST00000504387 RANBP10Q6VN20 620 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 NECAB2Q7Z6G3 386 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 C11orf74Q86VG3 221 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 NLRP8Q86W28 1048 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 ARHGAP12Q8IWW6 846 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 TTC39CQ8N584 583 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 NATD1Q8N6N6 113 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 EEF1AKMT1Q8WVE0 214 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 GFM1Q96RP9 751 aaKnown RBP7.47□□□□□ -1.21
NEDD9-208ENST00000504387 COPS4Q9BT78 406 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 TTPALQ9BTX7 342 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 SPON2Q9BUD6 331 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 AGO3Q9H9G7 860 aaKnown RBP7.47□□□□□ -1.21
NEDD9-208ENST00000504387 SLC52A3Q9NQ40 469 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 GPR83Q9NYM4 423 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 SAMHD1Q9Y3Z3 626 aaKnown RBP7.47□□□□□ -1.21
NEDD9-208ENST00000504387 PRKAB1Q9Y478 270 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 IPPQ9Y573 584 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 NRCAMQ92823 1304 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 VCANP13611 3396 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 PDHXO00330 501 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 MTSS1O43312 755 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 AKR7A2O43488 359 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 SEC22BO75396 215 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 CNMDO75829 334 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 CRYZL1O95825 349 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 TBX18O95935 607 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 ZFP36L2P47974 494 aaKnown RBP7.47□□□□□ -1.21
NEDD9-208ENST00000504387 CSRP3P50461 194 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 DAPP51397 102 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 EEFSECP57772 596 aaKnown RBP7.47□□□□□ -1.21
NEDD9-208ENST00000504387 GBX1Q14549 363 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 SF1Q15637 639 aaKnown RBP7.47□□□□□ -1.21
NEDD9-208ENST00000504387 GPRIN3Q6ZVF9 776 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 RASAL3Q86YV0 1011 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 ADHFE1Q8IWW8 467 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 PGBD5Q8N414 524 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 CAMKK1Q8N5S9 505 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 ZMIZ2Q8NF64 920 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 DNASE1L2Q92874 299 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 VMP1Q96GC9 406 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 TXNDC15Q96J42 360 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 OR52E6Q96RD3 313 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 TMEM209Q96SK2 561 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 BTBD2Q9BX70 525 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 SP110Q9HB58 689 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 USE1Q9NZ43 259 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 TMEFF2Q9UIK5 374 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-208ENST00000504387 RNF6Q9Y252 685 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 NINQ8N4C6 2090 aa7.47□□□□□ -1.21
NEDD9-208ENST00000504387 CCL15-CCL14A0A0B4J2E2 113 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 A0A1W2PQ72 361 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 OR6C70A6NIJ9 312 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 A8MUA0 341 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 RFXAPO00287 272 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 NDUFS3O75489 264 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 EEDO75530 441 aaKnown RBP7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms