RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 DENND5AQ6IQ26 1287 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 SPESP1Q6UW49 350 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 FAM198BQ6UWH4 519 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 CDHR3Q6ZTQ4 885 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 ADGRF3Q8IZF5 1079 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 CLDN19Q8N6F1 224 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 RBMXL3Q8N7X1 1067 aaKnown RBP11.64□□□□□ -0.55
CNOT4-211ENST00000498534 CLEC1AQ8NC01 280 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 HGH1Q9BTY7 390 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 TSPY26PQ9H489 355 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 XKR8Q9H6D3 395 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 NLE1Q9NVX2 485 aaPredicted RBP11.64□□□□□ -0.55
CNOT4-211ENST00000498534 SMARCAL1Q9NZC9 954 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 LUZP4Q9P127 313 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 POLG2Q9UHN1 485 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 VPS9D1Q9Y2B5 631 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 UNC79Q9P2D8 2635 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 TRBV5-4A0A0C4DH59 114 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 H7C0S8 307 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 QSOX1O00391 747 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 LIN7AO14910 233 aaPredicted RBP11.63□□□□□ -0.55
CNOT4-211ENST00000498534 PSMD3O43242 534 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 KDM1AO60341 852 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 KLF7O75840 302 aaPredicted RBP11.63□□□□□ -0.55
CNOT4-211ENST00000498534 CTNNA1P35221 906 aaKnown RBP11.63□□□□□ -0.55
CNOT4-211ENST00000498534 PTPN7P35236 360 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 FOLR3P41439 243 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 NSG1P42857 185 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 CDKN1CP49918 316 aaPredicted RBP11.63□□□□□ -0.55
CNOT4-211ENST00000498534 RWDD2BP57060 319 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 DCDP81605 110 aaKnown RBP11.63□□□□□ -0.55
CNOT4-211ENST00000498534 PLOD1Q02809 727 aaPredicted RBP11.63□□□□□ -0.55
CNOT4-211ENST00000498534 CACNG1Q06432 222 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 RAPSNQ13702 412 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 PARP6Q2NL67 630 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 PLEKHN1Q494U1 663 aaPredicted RBP11.63□□□□□ -0.55
CNOT4-211ENST00000498534 VWA5B1Q5TIE3 1220 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 LYPLAL1Q5VWZ2 237 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 UNC5AQ6ZN44 842 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 ARHGEF18Q6ZSZ5 1173 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 IQCKQ8N0W5 287 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 Q8NA96 180 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 RNF214Q8ND24 703 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 STYXQ8WUJ0 223 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 PTERQ96BW5 349 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 CDKN2AIPNLQ96HQ2 116 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 DNAJC1Q96KC8 554 aaKnown RBP11.63□□□□□ -0.55
CNOT4-211ENST00000498534 AP1M1Q9BXS5 423 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 CHRNA10Q9GZZ6 450 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 SPRTNQ9H040 489 aaPredicted RBP11.63□□□□□ -0.55
CNOT4-211ENST00000498534 TXLNGQ9NUQ3 528 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 IRAK4Q9NWZ3 460 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 IFT80Q9P2H3 777 aaPredicted RBP11.63□□□□□ -0.55
CNOT4-211ENST00000498534 NDOR1Q9UHB4 597 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 TFR2Q9UP52 801 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 ASF1AQ9Y294 204 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 PTRH2Q9Y3E5 179 aaKnown RBP11.63□□□□□ -0.55
CNOT4-211ENST00000498534 PIKFYVEQ9Y2I7 2098 aa11.63□□□□□ -0.55
CNOT4-211ENST00000498534 SHANK1Q9Y566 2161 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 NBPF19A0A087WUL8 3843 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 GOLGA6L9A6NEM1 432 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 F8W8V4 182 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 PJA2O43164 708 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 IPO13O94829 963 aaKnown RBP11.62□□□□□ -0.55
CNOT4-211ENST00000498534 IPO7O95373 1038 aaKnown RBP11.62□□□□□ -0.55
CNOT4-211ENST00000498534 FTH1P02794 183 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 CBSLP0DN79 551 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 UGT2B7P16662 529 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 TPH1P17752 444 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 CBSP35520 551 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 MRPL49Q13405 166 aaKnown RBP11.62□□□□□ -0.55
CNOT4-211ENST00000498534 ZNF658BQ4V348 819 aaPredicted RBP11.62□□□□□ -0.55
CNOT4-211ENST00000498534 PRR30Q53SZ7 412 aaPredicted RBP11.62□□□□□ -0.55
CNOT4-211ENST00000498534 C1orf189Q5VU69 101 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 HIST2H2BCQ6DN03 193 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 RHBDD2Q6NTF9 364 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 TLDC1Q6P9B6 456 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 MRGPREQ86SM8 312 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 TBC1D21Q8IYX1 336 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 C19orf47Q8N9M1 422 aaKnown RBP11.62□□□□□ -0.55
CNOT4-211ENST00000498534 TC2NQ8N9U0 490 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 TTC13Q8NBP0 860 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 OR5AR1Q8NGP9 310 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 PROKR1Q8TCW9 393 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 TM9SF4Q92544 642 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 ELMO1Q92556 727 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 TTC1Q99614 292 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 NRTNQ99748 197 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 FAM118BQ9BPY3 351 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 NDC1Q9BTX1 674 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 TRIM5Q9C035 493 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 LRRC40Q9H9A6 602 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 FAM60AQ9NP50 221 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 OR6C2Q9NZP2 312 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 SRPK3Q9UPE1 567 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 ICKQ9UPZ9 632 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 B3GNT3Q9Y2A9 372 aa11.62□□□□□ -0.55
CNOT4-211ENST00000498534 TDRKHQ9Y2W6 561 aaKnown RBP11.62□□□□□ -0.55
CNOT4-211ENST00000498534 CCDC78A2IDD5 438 aa11.61□□□□□ -0.55
CNOT4-211ENST00000498534 ISM1B1AKI9 464 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms