RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 C6orf136Q5SQH8 315 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 SPATA19Q7Z5L4 167 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 SYVN1Q86TM6 617 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 STX19Q8N4C7 294 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 DACT3Q96B18 629 aaPredicted RBP12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 TMCO6Q96DC7 493 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 MRPL9Q9BYD2 267 aaKnown RBP12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 GLOD4Q9HC38 313 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 SARS2Q9NP81 518 aaKnown RBP12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 MUTYHQ9UIF7 546 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 A0A1W2PQ09 198 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 CLDN24A6NM45 220 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 ZNF780AO75290 641 aaPredicted RBP12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 PRKACAP17612 351 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 ARF4P18085 180 aaPredicted RBP12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 HUNKP57058 714 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 RAB25P57735 213 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 PTGR1Q14914 329 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 MAD2L1BPQ15013 274 aaPredicted RBP12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 KIAA0930Q6ICG6 404 aaPredicted RBP12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 DLEU7Q6UYE1 221 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 TMEM209Q96SK2 561 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 FZD8Q9H461 694 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 ANKHQ9HCJ1 492 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 CCNB1IP1Q9NPC3 277 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 ZNF214Q9UL59 606 aaPredicted RBP12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 HMX3A6NHT5 357 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 M0R082 166 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 NCAM2O15394 837 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 CD1DP15813 335 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 TGM4P49221 684 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 SMARCB1Q12824 385 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 CCDC85BQ15834 202 aaPredicted RBP12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 RFX4Q33E94 735 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 CARD16Q5EG05 197 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 COQ5Q5HYK3 327 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 TOR2AQ5JU69 321 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 ANKRD46Q86W74 232 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 YIPF7Q8N8F6 280 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 ZNF557Q8N988 423 aaPredicted RBP12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 OR2A14Q96R47 310 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 ULBP1Q9BZM6 244 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 ASB7Q9H672 318 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 ZC4H2Q9NQZ6 224 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 SAMHD1Q9Y3Z3 626 aaKnown RBP12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 PCDHGB1Q9Y5G3 927 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 SLX4Q8IY92 1834 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 BPTFQ12830 3046 aa12.81□□□□□ -0.36
GAPVD1-220ENST00000497580 ITGB1P05556 798 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 STSP08842 583 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 CYP2A6P11509 494 aaPredicted RBP12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 SLC2A4P14672 509 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 PKLRP30613 574 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 TNFSF8P32971 234 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 HTR6P50406 440 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 DAPP51397 102 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 WNT3AP56704 352 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 ERVK-8P63133 956 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 BAK1Q16611 211 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 FAM174BQ3ZCQ3 159 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 DPP9Q86TI2 863 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 SLC44A2Q8IWA5 706 aaPredicted RBP12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 KIAA1958Q8N8K9 716 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 NETO1Q8TDF5 533 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 GPR151Q8TDV0 419 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 COQ8BQ96D53 544 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 FAM120BQ96EK7 910 aaKnown RBP12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 MSANTD3Q96H12 275 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 KCNC2Q96PR1 638 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 CAMKK2Q96RR4 588 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 B3GNT4Q9C0J1 378 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 WDCPQ9H6R7 721 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 ACOXLQ9NUZ1 547 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 ZMYM5Q9UJ78 669 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 ERN1O75460 977 aaKnown RBP12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 OR2B3O76000 313 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 CHRM5P08912 532 aaPredicted RBP12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 PRSS56P0CW18 603 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 DPEP1P16444 411 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 MYL9P24844 172 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 SSTR4P31391 388 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 CCR1P32246 355 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 RPL38P63173 70 aaKnown RBP12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 MAPKAPK3Q16644 382 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 ZFAND4Q86XD8 727 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 ST13P5Q8NFI4 369 aaPredicted RBP12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 BRSK1Q8TDC3 778 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 ZNF419Q96HQ0 510 aaPredicted RBP12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 TBATAQ96M53 351 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 CNPPD1Q9BV87 410 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 HDHD5Q9BXW7 423 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 TM9SF3Q9HD45 589 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 CACNG4Q9UBN1 327 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 EIF2B4Q9UI10 523 aaKnown RBP12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 CPA4Q9UI42 421 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 TMPRSS11EQ9UL52 423 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 ABCG2Q9UNQ0 655 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 ZNF638Q14966 1978 aaKnown RBP12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 NPEPPSL1A6NEC2 478 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 SLC16A6O15403 523 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms