RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 HEATR5BQ9P2D3 2071 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.77□□□□□ -1.33
USP39-219ENST00000496047 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.77□□□□□ -1.33
USP39-219ENST00000496047 FAM234BA2RU67 622 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 KLHL33A6NCF5 533 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 TBC1D3BA6NDS4 549 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 LRRC14BA6NHZ5 514 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 LIN7AO14910 233 aaPredicted RBP6.77□□□□□ -1.33
USP39-219ENST00000496047 GPR39O43194 453 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 UGDHO60701 494 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 TBX10O75333 385 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 ULK1O75385 1050 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 MYO1DO94832 1006 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 PAPLNO95428 1278 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 RPN2P04844 631 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 CAPN1P07384 714 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 RPSAP08865 295 aaKnown RBP6.77□□□□□ -1.33
USP39-219ENST00000496047 CISD3P0C7P0 127 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 PRR35P0CG20 571 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 GM2AP17900 193 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 GPX3P22352 226 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 GPR1P46091 355 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 PSMD8P48556 350 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 PRLHRP49683 370 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 AGTR2P50052 363 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 POLR2JP52435 117 aaKnown RBP6.77□□□□□ -1.33
USP39-219ENST00000496047 HK3P52790 923 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 THOP1P52888 689 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 PHEXP78562 749 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 MRPS35P82673 323 aaKnown RBP6.77□□□□□ -1.33
USP39-219ENST00000496047 EMX2Q04743 252 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 SFSWAPQ12872 951 aaKnown RBP6.77□□□□□ -1.33
USP39-219ENST00000496047 TRIM25Q14258 630 aaKnown RBP6.77□□□□□ -1.33
USP39-219ENST00000496047 CBX2Q14781 532 aaPredicted RBP6.77□□□□□ -1.33
USP39-219ENST00000496047 PTPRRQ15256 657 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 HNRNPA1L2Q32P51 320 aaKnown RBP6.77□□□□□ -1.33
USP39-219ENST00000496047 GRAMD1BQ3KR37 738 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 UGT3A2Q3SY77 523 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 GGTA1PQ4G0N0 100 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 TRIM68Q6AZZ1 485 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 RAET1GQ6H3X3 334 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 PARS2Q7L3T8 475 aaKnown RBP6.77□□□□□ -1.33
USP39-219ENST00000496047 DET1Q7L5Y6 550 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 APLFQ8IW19 511 aaPredicted RBP6.77□□□□□ -1.33
USP39-219ENST00000496047 RAB42Q8N4Z0 105 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 MINDY1Q8N5J2 469 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 AADATQ8N5Z0 425 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 CLDN19Q8N6F1 224 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 TERB1Q8NA31 727 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 GOLM1Q8NBJ4 401 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 ICA1LQ8NDH6 482 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 HIPK4Q8NE63 616 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 BHLHE22Q8NFJ8 381 aaPredicted RBP6.77□□□□□ -1.33
USP39-219ENST00000496047 LKAAEAR1Q8TD35 194 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 BTN2A2Q8WVV5 523 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 REPS1Q96D71 796 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 DTD2Q96FN9 168 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 MRGPRX3Q96LB0 322 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 RIPOR3Q96MK2 946 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 KCNA7Q96RP8 456 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 SH3GL1Q99961 368 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 CCM2Q9BSQ5 444 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 SLC12A9Q9BXP2 914 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 EBF3Q9H4W6 596 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 ELOVL6Q9H5J4 265 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 NSUN3Q9H649 340 aaKnown RBP6.77□□□□□ -1.33
USP39-219ENST00000496047 EPHX3Q9H6B9 360 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 FBRSQ9HAH7 460 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 SLC28A3Q9HAS3 691 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 TRPV4Q9HBA0 871 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 SDR39U1Q9NRG7 319 aaPredicted RBP6.77□□□□□ -1.33
USP39-219ENST00000496047 HEBP1Q9NRV9 189 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 DNAJC11Q9NVH1 559 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 NMRK1Q9NWW6 199 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 GALPQ9UBC7 116 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 KLQ9UEF7 1012 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 MCM8Q9UJA3 840 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 CDH7Q9ULB5 785 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 TMED5Q9Y3A6 229 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 POLR3HQ9Y535 204 aaPredicted RBP6.77□□□□□ -1.33
USP39-219ENST00000496047 TIMM22Q9Y584 194 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 PRSS21Q9Y6M0 314 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 FANCMQ8IYD8 2048 aa6.77□□□□□ -1.33
USP39-219ENST00000496047 PRRC2BQ5JSZ5 2229 aaKnown RBP6.76□□□□□ -1.33
USP39-219ENST00000496047 A0A0U1RQS6 177 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 A0A1W2PP18 115 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 ZNF839A8K0R7 811 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 H3BM21 787 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 VEGFDO43915 354 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 EEDO75530 441 aaKnown RBP6.76□□□□□ -1.33
USP39-219ENST00000496047 BCAS2O75934 225 aaPredicted RBP6.76□□□□□ -1.33
USP39-219ENST00000496047 RSL1D1O76021 490 aaKnown RBP6.76□□□□□ -1.33
USP39-219ENST00000496047 KCNH1O95259 989 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 ZIC2O95409 532 aaPredicted RBP6.76□□□□□ -1.33
USP39-219ENST00000496047 ALDOCP09972 364 aaKnown RBP6.76□□□□□ -1.33
USP39-219ENST00000496047 PRPS2P11908 318 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 FCGR1AP12314 374 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 ADRB3P13945 408 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 TIMP2P16035 220 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 PSMA4P25789 261 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms