RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 PSMD13Q9UNM6 376 aa11.79□□□□□ -0.52
BRD3-206ENST00000494743 R4GN57 208 aa11.79□□□□□ -0.52
BRD3-206ENST00000494743 SETXQ7Z333 2677 aaKnown RBP11.79□□□□□ -0.52
BRD3-206ENST00000494743 LRP4O75096 1905 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 FANCMQ8IYD8 2048 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 KRT87PA6NCN2 255 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 NCF1BA6NI72 391 aaPredicted RBP11.78□□□□□ -0.52
BRD3-206ENST00000494743 OR52A4PA6NMU1 304 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 NCF1CA8MVU1 366 aaPredicted RBP11.78□□□□□ -0.52
BRD3-206ENST00000494743 IFRD1O00458 451 aaPredicted RBP11.78□□□□□ -0.52
BRD3-206ENST00000494743 SERPINE1P05121 402 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 RPS17P08708 135 aaKnown RBP11.78□□□□□ -0.52
BRD3-206ENST00000494743 GFAPP14136 432 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 NCF1P14598 390 aaPredicted RBP11.78□□□□□ -0.52
BRD3-206ENST00000494743 LSP1P33241 339 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 NAGLUP54802 743 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 HERVK_113P63132 956 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 GNGT1P63211 74 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 SIM2Q14190 667 aaPredicted RBP11.78□□□□□ -0.52
BRD3-206ENST00000494743 GRB7Q14451 532 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 TCEA2Q15560 299 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 PFKFB4Q16877 469 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 ZXDCQ2QGD7 858 aaPredicted RBP11.78□□□□□ -0.52
BRD3-206ENST00000494743 KIF19Q2TAC6 998 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 CCSMST1Q4G0I0 132 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 PRRT3Q5FWE3 981 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 ZNF678Q5SXM1 525 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 SLC30A9Q6PML9 568 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 MBOAT1Q6ZNC8 495 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 ATG14Q6ZNE5 492 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 ZCCHC23Q6ZST2 131 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 DCUN1D3Q8IWE4 304 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 TRIM42Q8IWZ5 723 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 FBXO39Q8N4B4 442 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 OR5AR1Q8NGP9 310 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 OR5K2Q8NHB8 316 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 CFAP61Q8NHU2 1237 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 LRRC8CQ8TDW0 803 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 C12orf66Q96MD2 445 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 ZNF317Q96PQ6 595 aaPredicted RBP11.78□□□□□ -0.52
BRD3-206ENST00000494743 TMEM79Q9BSE2 394 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 MENTQ9BUN1 341 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 ERVK-6Q9BXR3 956 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 GSDMCQ9BYG8 508 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 MANSC1Q9H8J5 431 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 CD274Q9NZQ7 290 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 TAAR2Q9P1P5 351 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 ASF1AQ9Y294 204 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 ASB1Q9Y576 335 aa11.78□□□□□ -0.52
BRD3-206ENST00000494743 CFAP20Q9Y6A4 193 aaKnown RBP11.78□□□□□ -0.52
BRD3-206ENST00000494743 TNRC6BQ9UPQ9 1833 aaKnown RBP11.77□□□□□ -0.52
BRD3-206ENST00000494743 PDZK1P1A8MUH7 402 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 TAPBPO15533 448 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 SNX2O60749 519 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 SNNO75324 88 aaPredicted RBP11.77□□□□□ -0.53
BRD3-206ENST00000494743 H2AFYO75367 372 aaKnown RBP11.77□□□□□ -0.53
BRD3-206ENST00000494743 SIX3O95343 332 aaPredicted RBP11.77□□□□□ -0.53
BRD3-206ENST00000494743 GUCA1CO95843 209 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 RPN2P04844 631 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 ANXA5P08758 320 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 MTHFD1P11586 935 aaKnown RBP11.77□□□□□ -0.53
BRD3-206ENST00000494743 F3P13726 295 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 CTSEP14091 401 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 IMPDH1P20839 514 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 GRK2P25098 689 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 MAP4P27816 1152 aaKnown RBP11.77□□□□□ -0.53
BRD3-206ENST00000494743 ARRB2P32121 409 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 GGT5P36269 586 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 DPP6P42658 865 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 AGTR2P50052 363 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 HNRNPKP61978 463 aaKnown RBP eCLIP11.77□□□□□ -0.53
BRD3-206ENST00000494743 BST1Q10588 318 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 PCBP2Q15366 365 aaKnown RBP eCLIP11.77□□□□□ -0.532e-9■□□□□ 10.6
BRD3-206ENST00000494743 ELOCQ15369 112 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 RPE65Q16518 533 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 TUBB8Q3ZCM7 444 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 SULT1C3Q6IMI6 304 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 DUS1LQ6P1R4 473 aaKnown RBP11.77□□□□□ -0.53
BRD3-206ENST00000494743 FRMD7Q6ZUT3 714 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 TBC1D21Q8IYX1 336 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 TCAIMQ8N3R3 496 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 ZNF548Q8NEK5 533 aaPredicted RBP11.77□□□□□ -0.53
BRD3-206ENST00000494743 MCOLN3Q8TDD5 553 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 SREK1Q8WXA9 508 aaKnown RBP11.77□□□□□ -0.53
BRD3-206ENST00000494743 PIGKQ92643 395 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 FBXL8Q96CD0 374 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 MOCOSQ96EN8 888 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 CCDC138Q96M89 665 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 PKP4Q99569 1192 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 TRIM54Q9BYV2 358 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 C20orf27Q9GZN8 174 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 CAPN10Q9HC96 672 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 ARL15Q9NXU5 204 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 SNX11Q9Y5W9 270 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 PIKFYVEQ9Y2I7 2098 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 ABCA7Q8IZY2 2146 aa11.77□□□□□ -0.53
BRD3-206ENST00000494743 LRRC14BA6NHZ5 514 aa11.76□□□□□ -0.53
BRD3-206ENST00000494743 SRRM3A6NNA2 597 aaPredicted RBP11.76□□□□□ -0.53
BRD3-206ENST00000494743 TCP11X1B4DZS4 312 aa11.76□□□□□ -0.53
BRD3-206ENST00000494743 E2F3O00716 465 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms