RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 IRF4Q15306 451 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 MLF2Q15773 248 aaPredicted RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 GSTA3Q16772 222 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 PTCHD3Q3KNS1 767 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 TTC31Q49AM3 519 aaPredicted RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 CLEC6AQ6EIG7 209 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 C8orf82Q6P1X6 216 aaPredicted RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 WASH2PQ6VEQ5 465 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 ZNF852Q6ZMS4 543 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 FAM83HQ6ZRV2 1179 aaPredicted RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 SPATA19Q7Z5L4 167 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 HEATR4Q86WZ0 1026 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 FUNDC1Q8IVP5 155 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 OR4F6Q8NGB9 312 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 OR2T34Q8NGX1 318 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 RPLP0P6Q8NHW5 317 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 TWIST2Q8WVJ9 160 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 ATL1Q8WXF7 558 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 ESAMQ96AP7 390 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 CLDN23Q96B33 292 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 CMTM5Q96DZ9 223 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 C11orf24Q96F05 449 aaPredicted RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 METTL2AQ96IZ6 378 aaKnown RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 BMFQ96LC9 184 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 MAGEB10Q96LZ2 347 aaPredicted RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 HHIPQ96QV1 700 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 NELL2Q99435 816 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 TIMM29Q9BSF4 260 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 RTKNQ9BST9 563 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 SGPP1Q9BX95 441 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 CADM1Q9BY67 442 aaKnown RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 TRIM54Q9BYV2 358 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 OSBPL6Q9BZF3 934 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 SHCBP1LQ9BZQ2 653 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 BTBD1Q9H0C5 482 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 RASSF4Q9H2L5 321 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 NOL11Q9H8H0 719 aaKnown RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 IPPKQ9H8X2 491 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 SEMA4BQ9NPR2 832 aaPredicted RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 WASH6PQ9NQA3 447 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 PFDN4Q9NQP4 134 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 SDR39U1Q9NRG7 319 aaPredicted RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 INTS7Q9NVH2 962 aaKnown RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 ARL15Q9NXU5 204 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 UTP6Q9NYH9 597 aaKnown RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 GPRC5BQ9NZH0 403 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 SLC23A2Q9UGH3 650 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 PCOLCE2Q9UKZ9 415 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 ACSL5Q9ULC5 683 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 GPR45Q9Y5Y3 372 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 COPG1Q9Y678 874 aaKnown RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 MYO10Q9HD67 2058 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 TRPM6Q9BX84 2022 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 GOLGA8QA0A0J9YX86 632 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 GOLGA8OA6NCC3 632 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 NCF1BA6NI72 391 aaPredicted RBP6.61□□□□□ -1.35
MSH5-217ENST00000494458 NCF1CA8MVU1 366 aaPredicted RBP6.61□□□□□ -1.35
MSH5-217ENST00000494458 B2RBV5 119 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 E9PBE3 544 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 GOLGA8NF8WBI6 632 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 H0YIV9 168 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 H3BM21 787 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 PIP5K1BO14986 540 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 ANKRD28O15084 1053 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 UBDO15205 165 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 KMOO15229 486 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 KLHL41O60662 606 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 OR4F21O95013 312 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 PCDH8O95206 1070 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 APBB3O95704 486 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 GUCA1CO95843 209 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 CATP04040 527 aaKnown RBP6.61□□□□□ -1.35
MSH5-217ENST00000494458 S100BP04271 92 aaPredicted RBP6.61□□□□□ -1.35
MSH5-217ENST00000494458 CAPN1P07384 714 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 KRT16P08779 473 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 HIST1H2AGP0C0S8 130 aaPredicted RBP6.61□□□□□ -1.35
MSH5-217ENST00000494458 ESRRAP11474 423 aaPredicted RBP6.61□□□□□ -1.35
MSH5-217ENST00000494458 NCF1P14598 390 aaPredicted RBP6.61□□□□□ -1.35
MSH5-217ENST00000494458 CD1EP15812 388 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 EPB42P16452 691 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 LBPP18428 481 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 HIST1H2ADP20671 130 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 PIK3R1P27986 724 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 IMPA1P29218 277 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 NUDT1P36639 197 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 YPEL5P62699 121 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 EMX2Q04743 252 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 SGCGQ13326 291 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 DSG2Q14126 1118 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 SQLEQ14534 574 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 ARHGAP19Q14CB8 494 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 PDCD2Q16342 344 aaPredicted RBP6.61□□□□□ -1.35
MSH5-217ENST00000494458 CYP2A13Q16696 494 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 PYCR3Q53H96 274 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 FBXO48Q5FWF7 155 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 COQ5Q5HYK3 327 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 PRPF38BQ5VTL8 546 aaKnown RBP6.61□□□□□ -1.35
MSH5-217ENST00000494458 LIPJQ5W064 366 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 TMEM198Q66K66 360 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 PTCRAQ6ISU1 281 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms