RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 IHHQ14623 411 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 TAF12Q16514 161 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 PITRM1Q5JRX3 1037 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 MPP7Q5T2T1 576 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 PSAPL1Q6NUJ1 521 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 LETMD1Q6P1Q0 360 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 SBSNQ6UWP8 590 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 LYSMD3Q7Z3D4 306 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 NPAS4Q8IUM7 802 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 RBM12BQ8IXT5 1001 aaKnown RBP11.26□□□□□ -0.61
RFC4-214ENST00000494047 MICU2Q8IYU8 434 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 RNF168Q8IYW5 571 aaPredicted RBP11.26□□□□□ -0.61
RFC4-214ENST00000494047 DTWD1Q8N5C7 304 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 ZBTB2Q8N680 514 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 OR7D4Q8NG98 312 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 OR4F6Q8NGB9 312 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 OR2T11Q8NH01 316 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 USP7Q93009 1102 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 TMBIM1Q969X1 311 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 REXO5Q96IC2 774 aaKnown RBP11.26□□□□□ -0.61
RFC4-214ENST00000494047 CCDC138Q96M89 665 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 EGFL8Q99944 293 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 EMILIN2Q9BXX0 1053 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 LRTM1Q9HBL6 345 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 PREBQ9HCU5 417 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 HMG20AQ9NP66 347 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 RAD18Q9NS91 495 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 GALPQ9UBC7 116 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 MTRRQ9UBK8 725 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 PDE10AQ9Y233 779 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 INVSQ9Y283 1065 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 TPRKBQ9Y3C4 175 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 NAALAD2Q9Y3Q0 740 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 POLR3HQ9Y535 204 aaPredicted RBP11.26□□□□□ -0.61
RFC4-214ENST00000494047 A0A0D9SEW6 157 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 LINC01553A4QN01 128 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 ZNF840PA6NDX5 716 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 NCF1BA6NI72 391 aaPredicted RBP11.25□□□□□ -0.61
RFC4-214ENST00000494047 NCF1CA8MVU1 366 aaPredicted RBP11.25□□□□□ -0.61
RFC4-214ENST00000494047 EVPLLA8MZ36 301 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 M0QX08 132 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 CXCR6O00574 342 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 CLDN9O95484 217 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 TBX18O95935 607 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 IGSF6O95976 241 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 PGRP06401 933 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 ALOX5P09917 674 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 G6PDP11413 515 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 MTHFD1P11586 935 aaKnown RBP11.25□□□□□ -0.61
RFC4-214ENST00000494047 NCF1P14598 390 aaPredicted RBP11.25□□□□□ -0.61
RFC4-214ENST00000494047 CRHBPP24387 322 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 ACRV1P26436 265 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 CORO1AP31146 461 aaKnown RBP11.25□□□□□ -0.61
RFC4-214ENST00000494047 GRK3P35626 688 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 GGT5P36269 586 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 SPAM1P38567 509 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 TRPC1P48995 793 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 GPR15P49685 360 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 AP1S2P56377 157 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 PPP2R2BQ00005 443 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 CREMQ03060 361 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 TMED1Q13445 227 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 NFATC2Q13469 925 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 BOP1Q14137 746 aaKnown RBP11.25□□□□□ -0.61
RFC4-214ENST00000494047 FUT11Q495W5 492 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 Q6ZNX1 250 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 STK32CQ86UX6 486 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 CIR1Q86X95 450 aaPredicted RBP11.25□□□□□ -0.61
RFC4-214ENST00000494047 GPR65Q8IYL9 337 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 FCGR1BQ92637 280 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 GTF2H4Q92759 462 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 COX4I2Q96KJ9 171 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 SEPHS2Q99611 448 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 APOL4Q9BPW4 351 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 THUMPD3Q9BV44 507 aaKnown RBP11.25□□□□□ -0.61
RFC4-214ENST00000494047 ASPSCR1Q9BZE9 553 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 RAD21L1Q9H4I0 556 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 ATP13A3Q9H7F0 1226 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 CCSER2Q9H7U1 834 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 ACTR8Q9H981 624 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 ZFYVE1Q9HBF4 777 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 NECTIN3Q9NQS3 549 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 DCAF13Q9NV06 445 aaKnown RBP11.25□□□□□ -0.61
RFC4-214ENST00000494047 INTS7Q9NVH2 962 aaKnown RBP11.25□□□□□ -0.61
RFC4-214ENST00000494047 SCN3BQ9NY72 215 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 ADGRE2Q9UHX3 823 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 ENOPH1Q9UHY7 261 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 ZNF225Q9UK10 706 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 LSM7Q9UK45 103 aaKnown RBP11.25□□□□□ -0.61
RFC4-214ENST00000494047 BAG5Q9UL15 447 aa11.25□□□□□ -0.61
RFC4-214ENST00000494047 CROCCQ5TZA2 2017 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 FAM149AA5PLN7 773 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 H0Y626 953 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 KPNA4O00629 521 aaPredicted RBP11.24□□□□□ -0.61
RFC4-214ENST00000494047 PPP6CO00743 305 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 OR7A17O14581 309 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 PER2O15055 1255 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 E2F6O75461 281 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 STK16O75716 305 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 CLPXO76031 633 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms