RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 SHMT2P34897 504 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 RPS18P62269 152 aaKnown RBP8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 KRT33BQ14525 404 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 IGFBP7Q16270 282 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 CCNG2Q16589 344 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 TSTD2Q5T7W7 516 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 ZNF449Q6P9G9 518 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 ASB18Q6ZVZ8 466 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 SLC22A15Q8IZD6 547 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 DNAJC22Q8N4W6 341 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 GLIS1Q8NBF1 620 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 OR52K1Q8NGK4 314 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 OR5AR1Q8NGP9 310 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 MR1Q95460 341 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 HDAC10Q969S8 669 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 TCTN2Q96GX1 697 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 ZNF778Q96MU6 729 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 DESI2Q9BSY9 194 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 CARD6Q9BX69 1037 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 TLR10Q9BXR5 811 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 ING2Q9H160 280 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 FANCEQ9HB96 536 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 FAM60AQ9NP50 221 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 TREX1Q9NSU2 369 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 PIH1D1Q9NWS0 290 aaKnown RBP8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 SPHK1Q9NYA1 384 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 SMARCAL1Q9NZC9 954 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 FAM8A1Q9UBU6 413 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 SLC2A6Q9UGQ3 507 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 DRG1Q9Y295 367 aaKnown RBP8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 MAN2B2Q9Y2E5 1009 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 HEATR5BQ9P2D3 2071 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 TMEM150CB9EJG8 249 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 ZNF749O43361 778 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 PRICKLE3O43900 615 aaPredicted RBP8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 OR1I1O60431 355 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 SORBS2O94875 1100 aaKnown RBP8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 GOT2P00505 430 aaKnown RBP8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 CHRM5P08912 532 aaPredicted RBP8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 HBQ1P09105 142 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 PVRP15151 417 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 UGT2B7P16662 529 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 NR1D1P20393 614 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 AOAHP28039 575 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 PEBP1P30086 187 aaKnown RBP8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 CCR7P32248 378 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 ITGA1P56199 1179 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 SOX8P57073 446 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 PRKG2Q13237 762 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 UBAP2LQ14157 1087 aaKnown RBP8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 GRB7Q14451 532 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 SEMA3AQ14563 771 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 KIR2DS3Q14952 304 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 NCF4Q15080 339 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 KYNUQ16719 465 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 SLC5A12Q1EHB4 618 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 CCDC38Q502W7 563 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 DNAJC21Q5F1R6 531 aaKnown RBP8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 MEI1Q5TIA1 1274 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 ARMC3Q5W041 872 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 RHBDD2Q6NTF9 364 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 AFTPHQ6ULP2 937 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 HPS6Q86YV9 775 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 SYTL1Q8IYJ3 562 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 ZBTB2Q8N680 514 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 ENDOVQ8N8Q3 282 aaKnown RBP8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 C19orf47Q8N9M1 422 aaKnown RBP8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 OR4L1Q8NH43 312 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 ZNF285Q96NJ3 590 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 GBP5Q96PP8 586 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 DHRS4Q9BTZ2 278 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 AP1M1Q9BXS5 423 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 TSGA10Q9BZW7 698 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 P2RY12Q9H244 342 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 XKR8Q9H6D3 395 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 ACTR5Q9H9F9 607 aaPredicted RBP8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 EIF2B3Q9NR50 452 aaKnown RBP8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 SOHLH2Q9NX45 425 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 ASF1AQ9Y294 204 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 ZKSCAN5Q9Y2L8 839 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 KLK4Q9Y5K2 254 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 AP1M2Q9Y6Q5 423 aa8.09□□□□□ -1.11
SMARCB1-207ENST00000491967 NUP210LQ5VU65 1888 aa8.09□□□□□ -1.12
SMARCB1-207ENST00000491967 MDC1Q14676 2089 aaKnown RBP8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 GSAPA4D1B5 854 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 E7EQ34 232 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 OR56A5P0C7T3 313 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 ETS1P14921 441 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 ARNTP27540 789 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 RPL22P35268 128 aaKnown RBP8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 PTGIRP43119 386 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 LMAN1P49257 510 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 SSPNQ14714 243 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 PCID2Q5JVF3 399 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 CPZQ66K79 652 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 MRPL14Q6P1L8 145 aaKnown RBP8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 TLDC1Q6P9B6 456 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 UNC5DQ6UXZ4 953 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 C4orf22Q6V702 233 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms