RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 SPESP1Q6UW49 350 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 DET1Q7L5Y6 550 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 AMIGO1Q86WK6 493 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 RCOR2Q8IZ40 523 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 SLC34A3Q8N130 599 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 GALNT16Q8N428 558 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 OR52E1Q8NGJ3 308 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 OR13C4Q8NGS5 318 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 OR2Y1Q8NGV0 311 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 FLVCR1-AS1Q8TAF5 88 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 DCUN1D1Q96GG9 259 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 MRFAP1L1Q96HT8 127 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 GBP5Q96PP8 586 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 PANX2Q96RD6 677 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 COPS8Q99627 209 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 OSBPL8Q9BZF1 889 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 GBA3Q9H227 469 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 FAM96AQ9H5X1 160 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 COG4Q9H9E3 785 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 ASF1BQ9NVP2 202 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 FAM8A1Q9UBU6 413 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 RSPH14Q9UHP6 348 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 FEZ2Q9UHY8 353 aaPredicted RBP8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 FKBPLQ9UIM3 349 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 EFR3BQ9Y2G0 817 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 AAR2Q9Y312 384 aaKnown RBP8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 PCDHGA10Q9Y5H3 936 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 POLQO75417 2590 aa8.17□□□□□ -1.1
APOBEC3F-204ENST00000491387 A1L4Q6 167 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 CCDC78A2IDD5 438 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 CCDC66A2RUB6 948 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 GSAPA4D1B5 854 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 ANKUB1A6NFN9 424 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 A6NL46 340 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 APOC4-APOC2K7ER74 178 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 IFRD1O00458 451 aaPredicted RBP8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 KCNN4O15554 427 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 KRT86O43790 486 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 ZRANB2O95218 330 aaKnown RBP eCLIP8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 CRTAMO95727 393 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 APOC2P02655 101 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 CBSLP0DN79 551 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 ITGALP20701 1170 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 PSMA3P25788 255 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 CBSP35520 551 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 LMAN1P49257 510 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 CDKN1CP49918 316 aaPredicted RBP8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 DCDP81605 110 aaKnown RBP8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 KRT33BQ14525 404 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 NR6A1Q15406 480 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 ZIC1Q15915 447 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 ANKRD20A2Q5SQ80 823 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 ANKRD20A1Q5TYW2 823 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 ANKRD20A3Q5VUR7 823 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 LYPLAL1Q5VWZ2 237 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 ZNF787Q6DD87 383 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 ITPRIPL1Q6GPH6 555 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 DENND5AQ6IQ26 1287 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 IGFL2Q6UWQ7 119 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 CCDC170Q8IYT3 715 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 GPR135Q8IZ08 494 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 CISD2Q8N5K1 135 aaKnown RBP8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 C19orf47Q8N9M1 422 aaKnown RBP8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 TTC13Q8NBP0 860 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 CLEC1AQ8NC01 280 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 ST6GALNAC3Q8NDV1 305 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 COG1Q8WTW3 980 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 ATG4AQ8WYN0 398 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 TM9SF4Q92544 642 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 INPP5DQ92835 1189 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 PTERQ96BW5 349 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 C5orf34Q96MH7 638 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 PPP1R2P1Q96PQ5 205 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 OR2A14Q96R47 310 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 FERD3LQ96RJ6 166 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 RANBP9Q96S59 729 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 AP1M1Q9BXS5 423 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 VPS37BQ9H9H4 285 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 P4HTMQ9NXG6 502 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 ZDHHC3Q9NYG2 299 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 ACTR10Q9NZ32 417 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 OR6C2Q9NZP2 312 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 LUZP4Q9P127 313 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 CRLS1Q9UJA2 301 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 SRPK3Q9UPE1 567 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 PCDHA3Q9Y5H8 950 aa8.16□□□□□ -1.1
APOBEC3F-204ENST00000491387 PEX12O00623 359 aa8.15□□□□□ -1.1
APOBEC3F-204ENST00000491387 LIN7AO14910 233 aaPredicted RBP8.15□□□□□ -1.1
APOBEC3F-204ENST00000491387 LDB2O43679 373 aa8.15□□□□□ -1.1
APOBEC3F-204ENST00000491387 CNOT3O75175 753 aaKnown RBP8.15□□□□□ -1.1
APOBEC3F-204ENST00000491387 ZNF189O75820 626 aaPredicted RBP8.15□□□□□ -1.1
APOBEC3F-204ENST00000491387 OR2B3O76000 313 aa8.15□□□□□ -1.1
APOBEC3F-204ENST00000491387 AP2A2O94973 939 aa8.15□□□□□ -1.1
APOBEC3F-204ENST00000491387 METTL18O95568 372 aa8.15□□□□□ -1.1
APOBEC3F-204ENST00000491387 UMODP07911 640 aa8.15□□□□□ -1.1
APOBEC3F-204ENST00000491387 RBP3P10745 1247 aa8.15□□□□□ -1.1
APOBEC3F-204ENST00000491387 PVRP15151 417 aa8.15□□□□□ -1.1
APOBEC3F-204ENST00000491387 CTNNA2P26232 953 aa8.15□□□□□ -1.1
APOBEC3F-204ENST00000491387 ACRV1P26436 265 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms