RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 GLIS1Q8NBF1 620 aa11.37□□□□□ -0.59
ACTN4-206ENST00000489451 OR5AR1Q8NGP9 310 aa11.37□□□□□ -0.59
ACTN4-206ENST00000489451 CLIP3Q96DZ5 547 aa11.37□□□□□ -0.59
ACTN4-206ENST00000489451 CDKN2AIPNLQ96HQ2 116 aa11.37□□□□□ -0.59
ACTN4-206ENST00000489451 OR2A14Q96R47 310 aa11.37□□□□□ -0.59
ACTN4-206ENST00000489451 MVB12BQ9H7P6 319 aa11.37□□□□□ -0.59
ACTN4-206ENST00000489451 NLE1Q9NVX2 485 aaPredicted RBP11.37□□□□□ -0.59
ACTN4-206ENST00000489451 R3HDM2Q9Y2K5 976 aaKnown RBP11.37□□□□□ -0.59
ACTN4-206ENST00000489451 ANKRD12Q6UB98 2062 aa11.37□□□□□ -0.59
ACTN4-206ENST00000489451 TCRBV7S2A1N4TA0A589 114 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 CCDC78A2IDD5 438 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 MROH6A6NGR9 719 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 A6NL46 340 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 TCP11X1B4DZS4 312 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 BHMG1C9JSJ3 638 aaPredicted RBP11.36□□□□□ -0.59
ACTN4-206ENST00000489451 VPS4BO75351 444 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 PTMAP06454 111 aaKnown RBP11.36□□□□□ -0.59
ACTN4-206ENST00000489451 RALBP11234 206 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 UGT2B7P16662 529 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 CYP2A7P20853 494 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 FOXN2P32314 431 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 HADHAP40939 763 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 GCGRP47871 477 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 RPA4Q13156 261 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 KLF1Q13351 362 aaPredicted RBP11.36□□□□□ -0.59
ACTN4-206ENST00000489451 MRPL49Q13405 166 aaKnown RBP11.36□□□□□ -0.59
ACTN4-206ENST00000489451 RAPSNQ13702 412 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 KRT33BQ14525 404 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 PRPSAP1Q14558 356 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 POU6F1Q14863 301 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 INPP5JQ15735 1006 aaPredicted RBP11.36□□□□□ -0.59
ACTN4-206ENST00000489451 GPR33Q49SQ1 333 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 ZRANB3Q5FWF4 1079 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 DARS2Q6PI48 645 aaKnown RBP11.36□□□□□ -0.59
ACTN4-206ENST00000489451 SPESP1Q6UW49 350 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 UNC5AQ6ZN44 842 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 SYCE1Q8N0S2 351 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 C19orf47Q8N9M1 422 aaKnown RBP11.36□□□□□ -0.59
ACTN4-206ENST00000489451 SSC4DQ8WTU2 575 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 TFGQ92734 400 aaPredicted RBP11.36□□□□□ -0.59
ACTN4-206ENST00000489451 GBP5Q96PP8 586 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 SMAD5Q99717 465 aaKnown RBP11.36□□□□□ -0.59
ACTN4-206ENST00000489451 MENTQ9BUN1 341 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 MFRPQ9BY79 579 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 SPRTNQ9H040 489 aaPredicted RBP11.36□□□□□ -0.59
ACTN4-206ENST00000489451 FANCEQ9HB96 536 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 SYTL2Q9HCH5 934 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 VPS4AQ9UN37 437 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 PACSIN2Q9UNF0 486 aaPredicted RBP11.36□□□□□ -0.59
ACTN4-206ENST00000489451 ZNF451Q9Y4E5 1061 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 POLQO75417 2590 aa11.36□□□□□ -0.59
ACTN4-206ENST00000489451 SLC5A10A0PJK1 596 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 C2orf74A8MZ97 194 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 CFAP99D6REC4 459 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 E7EQ34 232 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 ITGAXP20702 1163 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 DCTP40126 519 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 RWDD2BP57060 319 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 FHL5Q5TD97 284 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 C1orf189Q5VU69 101 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 MRGPREQ86SM8 312 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 FAM20CQ8IXL6 584 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 UBL4BQ8N7F7 174 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 FAM71DQ8N9W8 422 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 LMNTD1Q8N9Z9 388 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 ACRBPQ8NEB7 543 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 OR13J1Q8NGT2 312 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 LKAAEAR1Q8TD35 194 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 STYXQ8WUJ0 223 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 HEXDCQ8WVB3 486 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 INPP5DQ92835 1189 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 MOCOSQ96EN8 888 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 C19orf60Q96EN9 201 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 SLC22A11Q9NSA0 550 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 DHCR7Q9UBM7 475 aaKnown RBP11.35□□□□□ -0.59
ACTN4-206ENST00000489451 FEZ2Q9UHY8 353 aaPredicted RBP11.35□□□□□ -0.59
ACTN4-206ENST00000489451 PLAGL1Q9UM63 463 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 PCDHGB7Q9Y5F8 929 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 CENPEQ02224 2701 aa11.35□□□□□ -0.59
ACTN4-206ENST00000489451 DOCK10Q96BY6 2186 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 CCDC162PA2VCL2 907 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 IFRD1O00458 451 aaPredicted RBP11.34□□□□□ -0.59
ACTN4-206ENST00000489451 KRT86O43790 486 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 NRDCO43847 1150 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 AP2A2O94973 939 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 TJP3O95049 919 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 AP2A1O95782 977 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 UMODP07911 640 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 CHRM5P08912 532 aaPredicted RBP11.34□□□□□ -0.59
ACTN4-206ENST00000489451 GRNP28799 593 aaKnown RBP11.34□□□□□ -0.59
ACTN4-206ENST00000489451 CACNG1Q06432 222 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 BRD3Q15059 726 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 PARP6Q2NL67 630 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 CCDC38Q502W7 563 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 CRYBG3Q68DQ2 2970 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 RHBDD2Q6NTF9 364 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 PACS1Q6VY07 963 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 MED25Q71SY5 747 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 TAS2R42Q7RTR8 314 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 PEX26Q7Z412 305 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms