RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 LGMNQ99538 433 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 VN1R1Q9GZP7 353 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 ARRDC1-AS1Q9H2J1 176 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 CPVLQ9H3G5 476 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 GPN1Q9HCN4 374 aaPredicted RBP1.99□□□□□ -2.09
CCDC93-209ENST00000488908 HHATLQ9HCP6 504 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 FGF21Q9NSA1 209 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 PPP2R2CQ9Y2T4 447 aa1.99□□□□□ -2.09
CCDC93-209ENST00000488908 KDM3AQ9Y4C1 1321 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 A0A087WWV3 80 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 LOC105371045A0A1W2PR82 267 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 EIF3FO00303 357 aaPredicted RBP1.98□□□□□ -2.09
CCDC93-209ENST00000488908 GAPDHSO14556 408 aaPredicted RBP1.98□□□□□ -2.09
CCDC93-209ENST00000488908 AVILO75366 819 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 LRCH4O75427 683 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 VTNP04004 478 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 ATP6V1B1P15313 513 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 PDX1P52945 283 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 PPFIA1Q13136 1202 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 TRPC3Q13507 836 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 UBE4AQ14139 1066 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 TAF12Q16514 161 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 MDH1BQ5I0G3 518 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 CES4AQ5XG92 561 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 NOTUMQ6P988 496 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 INO80CQ6PI98 192 aaPredicted RBP1.98□□□□□ -2.09
CCDC93-209ENST00000488908 NHLRC1Q6VVB1 395 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 FAM131BQ86XD5 332 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 ZFAND4Q86XD8 727 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 ARHGAP12Q8IWW6 846 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 TMTC2Q8N394 836 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 NKAPQ8N5F7 415 aaKnown RBP1.98□□□□□ -2.09
CCDC93-209ENST00000488908 CD177Q8N6Q3 437 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 KLHDC1Q8N7A1 406 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 TSPYL6Q8N831 410 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 GATAD1Q8WUU5 269 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 C10orf90Q96M02 699 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 NECTIN4Q96NY8 510 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 MPHOSPH6Q99547 160 aaKnown RBP1.98□□□□□ -2.09
CCDC93-209ENST00000488908 PIP5K1AQ99755 562 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 HGH1Q9BTY7 390 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 TDRD1Q9BXT4 1180 aaKnown RBP1.98□□□□□ -2.09
CCDC93-209ENST00000488908 B3GAT2Q9NPZ5 323 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 IKZF3Q9UKT9 509 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 STYXL1Q9Y6J8 313 aa1.98□□□□□ -2.09
CCDC93-209ENST00000488908 PRSS51A0A1B0GVH4 220 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 A0A1W2PQF6 199 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 SHISA7A6NL88 538 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 OGG1O15527 345 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 NDUFS4O43181 175 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 PHF1O43189 567 aaPredicted RBP1.97□□□□□ -2.09
CCDC93-209ENST00000488908 GPC4O75487 556 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 LY6G6DO95868 133 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 RPS3AP61247 264 aaKnown RBP1.97□□□□□ -2.09
CCDC93-209ENST00000488908 RPL7AP62424 266 aaKnown RBP1.97□□□□□ -2.09
CCDC93-209ENST00000488908 CEBPZQ03701 1054 aaKnown RBP1.97□□□□□ -2.09
CCDC93-209ENST00000488908 DMPKQ09013 629 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 TMEM115Q12893 351 aaPredicted RBP1.97□□□□□ -2.09
CCDC93-209ENST00000488908 MTF1Q14872 753 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 DLG2Q15700 870 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 GRTP1Q5TC63 336 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 TMEM207Q6UWW9 146 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 CATSPERDQ86XM0 798 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 C11orf42Q8N5U0 333 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 TMEM116Q8NCL8 245 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 PHLDA1Q8WV24 401 aaPredicted RBP1.97□□□□□ -2.09
CCDC93-209ENST00000488908 HVCN1Q96D96 273 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 CALML4Q96GE6 196 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 ATXN7L3BQ96GX2 97 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 SLC39A13Q96H72 371 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 FAM81BQ96LP2 452 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 DDOQ99489 341 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 CHCHD5Q9BSY4 110 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 NUP85Q9BW27 656 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 SMC4Q9NTJ3 1288 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 GTSE1Q9NYZ3 720 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 PNMA2Q9UL42 364 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 WIPI2Q9Y4P8 454 aa1.97□□□□□ -2.09
CCDC93-209ENST00000488908 TDRD6O60522 2096 aaKnown RBP1.96□□□□□ -2.1
CCDC93-209ENST00000488908 CCDC196A0A1B0GTZ2 297 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 KRTAP4-16G5E9R7 235 aaPredicted RBP1.96□□□□□ -2.1
CCDC93-209ENST00000488908 EPHB6O15197 1021 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 GLRA3O75311 464 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 GH2P01242 217 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 SLC2A2P11168 524 aaPredicted RBP1.96□□□□□ -2.1
CCDC93-209ENST00000488908 ACTN1P12814 892 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 ABCD3P28288 659 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 EPHA8P29322 1005 aaPredicted RBP1.96□□□□□ -2.1
CCDC93-209ENST00000488908 SLC6A6P31641 620 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 CLCN4P51793 760 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 GALCP54803 685 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 SNRPEP62304 92 aaKnown RBP1.96□□□□□ -2.1
CCDC93-209ENST00000488908 GOLGA8DPQ0D2H9 430 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 PNRC1Q12796 327 aaPredicted RBP1.96□□□□□ -2.1
CCDC93-209ENST00000488908 SQLEQ14534 574 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 TNIP1Q15025 636 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 EFTUD2Q15029 972 aaKnown RBP eCLIP1.96□□□□□ -2.1
CCDC93-209ENST00000488908 RNLSQ5VYX0 342 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 CCBE1Q6UXH8 406 aaPredicted RBP1.96□□□□□ -2.1
CCDC93-209ENST00000488908 CHMP1BQ7LBR1 199 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms