RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 ZNF554Q86TJ5 538 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 THNSL1Q8IYQ7 743 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 CPSF7Q8N684 471 aaKnown RBP3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 SETD6Q8TBK2 473 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 SYN2Q92777 582 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 HES6Q96HZ4 224 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 RMDN2Q96LZ7 410 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 NODALQ96S42 347 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 MYADMQ96S97 322 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 BTBD10Q9BSF8 475 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 EDEM3Q9BZQ6 932 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 BICC1Q9H694 974 aaKnown RBP3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 COQ3Q9NZJ6 369 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 RHCGQ9UBD6 479 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 TUBE1Q9UJT0 475 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 PADI2Q9Y2J8 665 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 SCN5AQ14524 2016 aa3.52□□□□□ -1.85
HMGB1P36-201ENST00000487709 ARHGEF37A1IGU5 675 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 PRR23AA6NEV1 266 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 ERI2A8K979 691 aaKnown RBP3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 GAPDHSO14556 408 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 PSMA7O14818 248 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 PRKNO60260 465 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 ZNF500O60304 480 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 DIAPH2O60879 1101 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 TBX10O75333 385 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 RAB40ALP0C0E4 278 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 TPD52P55327 224 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 KCNJ10P78508 379 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 KIF26BQ2KJY2 2108 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 SFMBT2Q5VUG0 894 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 MFSD12Q6NUT3 480 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 PET117Q6UWS5 81 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 NUDT13Q86X67 352 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 VSIG1Q86XK7 387 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 IQUBQ8NA54 791 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 SLC4A11Q8NBS3 891 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 CAMKVQ8NCB2 501 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 SLC24A4Q8NFF2 622 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 OR5M8Q8NGP6 311 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 KIF18AQ8NI77 898 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 RNF128Q8TEB7 428 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 SSMEM1Q8WWF3 244 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 TM9SF4Q92544 642 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 SIPA1Q96FS4 1042 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 PRRG4Q9BZD6 226 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 ZNF334Q9HCZ1 680 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 OLAHQ9NV23 265 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 DONSONQ9NYP3 566 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 PTTG2Q9NZH5 202 aa3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 ABT1Q9ULW3 272 aaKnown RBP3.51□□□□□ -1.85
HMGB1P36-201ENST00000487709 A0A1W2PN81 502 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 CTAGE9A4FU28 777 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 OR6C76A6NM76 312 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 P2RY10O00398 339 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 PRKRAO75569 313 aaKnown RBP3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 RECQL5O94762 991 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 DANCRP0C864 163 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 CTAGE8P0CG41 777 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 ANOS1P23352 680 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 CHRNA7P36544 502 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 MNDAP41218 407 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 ZNF41P51814 821 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 RBPJQ06330 500 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 CUL3Q13618 768 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 CEP85LQ5SZL2 805 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 GRTP1Q5TC63 336 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 STPG1Q5TH74 334 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 SLC27A1Q6PCB7 646 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 C19orf48Q6RUI8 117 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 MOXD1Q6UVY6 613 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 FAM198BQ6UWH4 519 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 C11orf57Q6ZUT1 292 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 PHLDB2Q86SQ0 1253 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 ISCA2Q86U28 154 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 METTL23Q86XA0 190 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 TICAM2Q86XR7 235 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 PLD3Q8IV08 490 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 CTAGE4Q8IX94 777 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 CDK20Q8IZL9 346 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 DNAJC22Q8N4W6 341 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 PI4KAP1Q8N8J0 262 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 OR2T12Q8NG77 320 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 OR1J1Q8NGS3 322 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 ZFAND2BQ8WV99 257 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 C17orf77Q96MU5 243 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 ZNF558Q96NG5 402 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 OLFM1Q99784 485 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 RHNO1Q9BSD3 238 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 NAA11Q9BSU3 229 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 URM1Q9BTM9 101 aaKnown RBP3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 PITPNM3Q9BZ71 974 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 ZWILCHQ9H900 591 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 ACKR4Q9NPB9 350 aa3.5□□□□□ -1.85
HMGB1P36-201ENST00000487709 HEPACAM2A8MVW5 462 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 BMPR1BO00238 502 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 LMX1BO60663 402 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 WISP2O76076 250 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 LUC7L3O95232 432 aaKnown RBP3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 GCNT3O95395 438 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms