RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 MTPNP58546 118 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 FOXM1Q08050 763 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 PRKD1Q15139 912 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-241ENST00000487169 FAM180AQ6UWF9 173 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 FAM98AQ8NCA5 519 aaKnown RBP13.11□□□□□ -0.31
HDLBP-241ENST00000487169 SMG8Q8ND04 991 aaKnown RBP13.11□□□□□ -0.31
HDLBP-241ENST00000487169 KBTBD8Q8NFY9 601 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 TFGQ92734 400 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-241ENST00000487169 ZNF354BQ96LW1 612 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 RAD9AQ99638 391 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 RACGAP1Q9H0H5 632 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 TPK1Q9H3S4 243 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 HCN1O60741 890 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 PRAMEF11O60813 436 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 EPOP01588 193 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 DLDP09622 509 aaKnown RBP13.11□□□□□ -0.31
HDLBP-241ENST00000487169 HLA-EP13747 358 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 NCK1P16333 377 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 NUP62P37198 522 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-241ENST00000487169 CREB5Q02930 508 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 ITGADQ13349 1161 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 DCTN2Q13561 401 aaKnown RBP13.11□□□□□ -0.31
HDLBP-241ENST00000487169 PTPRCAPQ14761 206 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 RAB30Q15771 203 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 DPY19L1Q2PZI1 675 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 AMZ1Q400G9 498 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 LRRTM4Q86VH4 590 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-241ENST00000487169 TMEM40Q8WWA1 233 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 IRF7Q92985 503 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 ROPN1LQ96C74 230 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 CADM1Q9BY67 442 aaKnown RBP13.11□□□□□ -0.31
HDLBP-241ENST00000487169 ADAMTS10Q9H324 1103 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 MRPS30Q9NP92 439 aaKnown RBP13.11□□□□□ -0.31
HDLBP-241ENST00000487169 B4GALT6Q9UBX8 382 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 MYH13Q9UKX3 1938 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 LEFTY2O00292 366 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 PCDH7O60245 1069 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 RPL10P27635 214 aaKnown RBP13.11□□□□□ -0.31
HDLBP-241ENST00000487169 XIAPP98170 497 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 SLC13A2Q13183 592 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 SNAPC1Q16533 368 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 ZSWIM7Q19AV6 140 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 LRRC66Q68CR7 880 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 TNFAIP8L2Q6P589 184 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-241ENST00000487169 SAMD14Q8IZD0 417 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-241ENST00000487169 TMEM145Q8NBT3 493 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 KCT2Q8NC54 265 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 UBASH3BQ8TF42 649 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 SLC22A18Q96BI1 424 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 FIZ1Q96SL8 496 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 GPR22Q99680 433 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 MUC13Q9H3R2 512 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 ZNF395Q9H8N7 513 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-241ENST00000487169 TMEM248Q9NWD8 314 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 VPS29Q9UBQ0 182 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 POMPQ9Y244 141 aa13.11□□□□□ -0.31
HDLBP-241ENST00000487169 LIN7AO14910 233 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-241ENST00000487169 COCHO43405 550 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 DNAJA2O60884 412 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 HOXB2P14652 356 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 ALDH4A1P30038 563 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 GSTT1P30711 240 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 HOXA11P31270 313 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-241ENST00000487169 RFC2P35250 354 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 NOVP48745 357 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 PCDH1Q08174 1060 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 KHDC1Q4VXA5 237 aaKnown RBP13.1□□□□□ -0.31
HDLBP-241ENST00000487169 SLC9B1Q4ZJI4 515 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 ALKBH2Q6NS38 261 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 USP29Q9HBJ7 922 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 MYADML2A6NDP7 307 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 FADS2P1A8MWK0 482 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 TMCC2O75069 709 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 TSC22D2O75157 780 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 ZNF865P0CJ78 1059 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-241ENST00000487169 ECHS1P30084 290 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 GDF5P43026 501 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 NFKB2Q00653 900 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 BNC1Q01954 994 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 C1orf220Q5T0J3 134 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 DCST1Q5T197 706 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 OR10T2Q8NGX3 314 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 C1GALT1C1Q96EU7 318 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 BTBD1Q9H0C5 482 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 SLC32A1Q9H598 525 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 FAM72CH0Y354 149 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 KDELR3O43731 214 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 FABP3P05413 133 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 IQCF3P0C7M6 154 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 IL7RP16871 459 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 PRDX6P30041 224 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 GKP32189 559 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 SRP54P61011 504 aaKnown RBP13.1□□□□□ -0.31
HDLBP-241ENST00000487169 FAM72AQ5TYM5 149 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 FRG2Q64ET8 278 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 FAM72DQ6L9T8 149 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 TMEM214Q6NUQ4 689 aaKnown RBP13.1□□□□□ -0.31
HDLBP-241ENST00000487169 FAM72BQ86X60 149 aa13.1□□□□□ -0.31
HDLBP-241ENST00000487169 FAM110BQ8TC76 370 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms