RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 TMEM216Q9P0N5 145 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 SIRPGQ9P1W8 387 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 CPSF2Q9P2I0 782 aaKnown RBP13.54□□□□□ -0.24
NELFCD-209ENST00000486263 POLG2Q9UHN1 485 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 PLLPQ9Y342 182 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 DCHS1Q96JQ0 3298 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 LRP4O75096 1905 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.53□□□□□ -0.24
NELFCD-209ENST00000486263 TMEM120BA0PK00 339 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 OR52A4PA6NMU1 304 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 GFYI3L273 518 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 TYROBPO43914 113 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 KERAO60938 352 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 PSIP1O75475 530 aaKnown RBP13.53□□□□□ -0.24
NELFCD-209ENST00000486263 C1orf105O95561 183 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 EML2O95834 649 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 TPBGLP0DKB5 382 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 MTHFD1P11586 935 aaKnown RBP13.53□□□□□ -0.24
NELFCD-209ENST00000486263 GFAPP14136 432 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 RPA3P35244 121 aaPredicted RBP13.53□□□□□ -0.24
NELFCD-209ENST00000486263 RPIAP49247 311 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 PPP2R2AP63151 447 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 FOXK2Q01167 660 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 SHBQ15464 509 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 OR4D1Q15615 310 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 INAVAQ3KP66 663 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 TECRLQ5HYJ1 363 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 HHATQ5VTY9 493 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 XKR5Q6UX68 686 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 CDHR3Q6ZTQ4 885 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 ISCA2Q86U28 154 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 DCUN1D3Q8IWE4 304 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 ARFGAP2Q8N6H7 521 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 ARMC2Q8NEN0 867 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 OR5AR1Q8NGP9 310 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 OR2I1PQ8NGU4 316 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 OR5K2Q8NHB8 316 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 SREK1Q8WXA9 508 aaKnown RBP13.53□□□□□ -0.24
NELFCD-209ENST00000486263 RAD51AP1Q96B01 352 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 PTERQ96BW5 349 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 GPR78Q96P69 363 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 FAM111AQ96PZ2 611 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 PAIP2Q9BPZ3 127 aaKnown RBP13.53□□□□□ -0.24
NELFCD-209ENST00000486263 SLC12A9Q9BXP2 914 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 ARL15Q9NXU5 204 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 UTP6Q9NYH9 597 aaKnown RBP13.53□□□□□ -0.24
NELFCD-209ENST00000486263 SCHIP1Q9P0W5 487 aaPredicted RBP13.53□□□□□ -0.24
NELFCD-209ENST00000486263 XPR1Q9UBH6 696 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 ADAMTS6Q9UKP5 1117 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 OARD1Q9Y530 152 aa13.53□□□□□ -0.24
NELFCD-209ENST00000486263 LNP1A1A4G5 178 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 NCF1BA6NI72 391 aaPredicted RBP13.52□□□□□ -0.25
NELFCD-209ENST00000486263 NCF1CA8MVU1 366 aaPredicted RBP13.52□□□□□ -0.25
NELFCD-209ENST00000486263 PLIN3O60664 434 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 GUCA1CO95843 209 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 ANXA5P08758 320 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 MYL2P10916 166 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 NEFHP12036 1026 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 NCF1P14598 390 aaPredicted RBP13.52□□□□□ -0.25
NELFCD-209ENST00000486263 XRCC1P18887 633 aaPredicted RBP13.52□□□□□ -0.25
NELFCD-209ENST00000486263 NR1D1P20393 614 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 BDKRB1P46663 353 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 AP1S2P56377 157 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 PRKG2Q13237 762 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 C6orf132Q5T0Z8 1188 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 DUS1LQ6P1R4 473 aaKnown RBP13.52□□□□□ -0.25
NELFCD-209ENST00000486263 SLC25A45Q8N413 288 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 RDH11Q8TC12 318 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 MGARPQ8TDB4 240 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 SLC37A2Q8TED4 501 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 SAP25Q8TEE9 199 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 HGH1Q9BTY7 390 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 RDH14Q9HBH5 336 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 POT1Q9NUX5 634 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 NLGN3Q9NZ94 848 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 SLC17A7Q9P2U7 560 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 CPNE7Q9UBL6 633 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 LNPEPQ9UIQ6 1025 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 IKZF3Q9UKT9 509 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 TMCO1Q9UM00 188 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 PDE10AQ9Y233 779 aa13.52□□□□□ -0.25
NELFCD-209ENST00000486263 TDRD6O60522 2096 aaKnown RBP13.51□□□□□ -0.25
NELFCD-209ENST00000486263 A6NCN8 305 aa13.51□□□□□ -0.25
NELFCD-209ENST00000486263 ZNF839A8K0R7 811 aa13.51□□□□□ -0.25
NELFCD-209ENST00000486263 ARHGEF33A8MVX0 844 aa13.51□□□□□ -0.25
NELFCD-209ENST00000486263 UBXN8O00124 270 aa13.51□□□□□ -0.25
NELFCD-209ENST00000486263 TK2O00142 265 aa13.51□□□□□ -0.25
NELFCD-209ENST00000486263 GDF9O60383 454 aa13.51□□□□□ -0.25
NELFCD-209ENST00000486263 PROCP04070 461 aa13.51□□□□□ -0.25
NELFCD-209ENST00000486263 ZNF883P0CG24 379 aa13.51□□□□□ -0.25
NELFCD-209ENST00000486263 CPA3P15088 417 aa13.51□□□□□ -0.25
NELFCD-209ENST00000486263 SLC19A1P41440 591 aa13.51□□□□□ -0.25
NELFCD-209ENST00000486263 PPM1FP49593 454 aaPredicted RBP13.51□□□□□ -0.25
NELFCD-209ENST00000486263 HHEXQ03014 270 aa13.51□□□□□ -0.25
NELFCD-209ENST00000486263 PLCL1Q15111 1095 aa13.51□□□□□ -0.25
NELFCD-209ENST00000486263 TGFBIQ15582 683 aa13.51□□□□□ -0.25
NELFCD-209ENST00000486263 STPG1Q5TH74 334 aa13.51□□□□□ -0.25
NELFCD-209ENST00000486263 ZCCHC8Q6NZY4 707 aaKnown RBP13.51□□□□□ -0.25
NELFCD-209ENST00000486263 SBSNQ6UWP8 590 aa13.51□□□□□ -0.25
NELFCD-209ENST00000486263 RAB44Q7Z6P3 723 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms