RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 GFYI3L273 518 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 C1orf105O95561 183 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 VIPP01282 170 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 ALDOAP04075 364 aaKnown RBP11.9□□□□□ -0.5
TRA2B-213ENST00000485530 TUBBP07437 444 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 PNLIPP16233 465 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 CD1CP29017 333 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 ALDH4A1P30038 563 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 ATP5DP30049 168 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 HALP42357 657 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 MSH2P43246 934 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 RPIAP49247 311 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 DAB2P98082 770 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 DLG1Q12959 904 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 USP10Q14694 798 aaKnown RBP11.9□□□□□ -0.5
TRA2B-213ENST00000485530 SYTL3Q4VX76 610 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 NKAIN2Q5VXU1 208 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 DHRS13Q6UX07 377 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 TMEM26Q6ZUK4 368 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 SLC9B2Q86UD5 537 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 IQCKQ8N0W5 287 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 MREGQ8N565 214 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 ASB11Q8WXH4 323 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 CXorf40BQ96DE9 158 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 CCDC3Q9BQI4 270 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 MENTQ9BUN1 341 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 EURLQ9NYK6 297 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 TXNDC16Q9P2K2 825 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 CTNNAL1Q9UBT7 734 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 TRMT6Q9UJA5 497 aaKnown RBP11.9□□□□□ -0.5
TRA2B-213ENST00000485530 ZNF180Q9UJW8 692 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 ADAMTS6Q9UKP5 1117 aa11.9□□□□□ -0.5
TRA2B-213ENST00000485530 ZFC3H1O60293 1989 aaKnown RBP11.9□□□□□ -0.5
TRA2B-213ENST00000485530 MGAQ8IWI9 3026 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 IGHV1OR21-1A0A087WYE8 117 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 EXOC1LA0A1B0GW35 172 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 RHPN2P1A8MT19 583 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 OPA1O60313 960 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 PSIP1O75475 530 aaKnown RBP11.89□□□□□ -0.51
TRA2B-213ENST00000485530 SLC35E2BP0CK96 405 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 KCNC1P48547 511 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 DUSP3P51452 185 aaPredicted RBP11.89□□□□□ -0.51
TRA2B-213ENST00000485530 PDAP1Q13442 181 aaKnown RBP11.89□□□□□ -0.51
TRA2B-213ENST00000485530 TMED2Q15363 201 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 CCDC157Q569K6 752 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.89□□□□□ -0.51
TRA2B-213ENST00000485530 BEND6Q5SZJ8 279 aaPredicted RBP11.89□□□□□ -0.51
TRA2B-213ENST00000485530 UGT3A1Q6NUS8 523 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 ZNF574Q6ZN55 896 aaPredicted RBP11.89□□□□□ -0.51
TRA2B-213ENST00000485530 LRRC69Q6ZNQ3 347 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 USP53Q70EK8 1073 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 SPRED1Q7Z699 444 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 MZB1Q8WU39 189 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 ZBTB9Q96C00 473 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 PDLIM5Q96HC4 596 aaKnown RBP11.89□□□□□ -0.51
TRA2B-213ENST00000485530 UBXN10Q96LJ8 280 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 UNKQ9C0B0 810 aaKnown RBP11.89□□□□□ -0.51
TRA2B-213ENST00000485530 XKR8Q9H6D3 395 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 KIR3DX1Q9H7L2 352 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 MVB12BQ9H7P6 319 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 UCK1Q9HA47 277 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 POT1Q9NUX5 634 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 NCKIPSDQ9NZQ3 722 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 FETUBQ9UGM5 382 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 SLC24A2Q9UI40 661 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 PLAGL1Q9UM63 463 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 ASF1AQ9Y294 204 aa11.89□□□□□ -0.51
TRA2B-213ENST00000485530 TEX51A0A1B0GUA7 166 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 ARHGEF33A8MVX0 844 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 TRIM49D1C9J1S8 452 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 CDC7O00311 574 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 IFRD1O00458 451 aaPredicted RBP11.88□□□□□ -0.51
TRA2B-213ENST00000485530 NTN3O00634 580 aaPredicted RBP11.88□□□□□ -0.51
TRA2B-213ENST00000485530 RFPL1O75677 317 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 TCEA3O75764 348 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 C2P06681 752 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 GP1BAP07359 652 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 INHBAP08476 426 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 NUDT17P0C025 328 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 MPC1LP0DKB6 136 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 CBSLP0DN79 551 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 SLC2A4P14672 509 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 ZNF37AP17032 561 aaPredicted RBP11.88□□□□□ -0.51
TRA2B-213ENST00000485530 CBSP35520 551 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 MAGEA12P43365 314 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 GPR3P46089 330 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 SLCO1A2P46721 670 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 IL2P60568 153 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 RAB10P61026 200 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 IRF9Q00978 393 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 INSM1Q01101 510 aaPredicted RBP11.88□□□□□ -0.51
TRA2B-213ENST00000485530 SQSTM1Q13501 440 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 ZXDCQ2QGD7 858 aaPredicted RBP11.88□□□□□ -0.51
TRA2B-213ENST00000485530 NEK10Q6ZWH5 1172 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 TMPRSS12Q86WS5 348 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 TBC1D21Q8IYX1 336 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 PLD6Q8N2A8 252 aaKnown RBP11.88□□□□□ -0.51
TRA2B-213ENST00000485530 OR4E2Q8NGC2 313 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 OR6C4Q8NGE1 309 aa11.88□□□□□ -0.51
TRA2B-213ENST00000485530 OR52E1Q8NGJ3 308 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms