RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 PROKR1Q8TCW9 393 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 ELMO1Q92556 727 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 TTC1Q99614 292 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 NRTNQ99748 197 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 BAG1Q99933 345 aaPredicted RBP11.08□□□□□ -0.64
SCFD1-206ENST00000484733 G3BP2Q9UN86 482 aaKnown RBP11.08□□□□□ -0.64
SCFD1-206ENST00000484733 ASF1AQ9Y294 204 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 PADI2Q9Y2J8 665 aa11.08□□□□□ -0.64
SCFD1-206ENST00000484733 TNRC6AQ8NDV7 1962 aaKnown RBP11.08□□□□□ -0.64
SCFD1-206ENST00000484733 A0A0J9YY10 115 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 HEATR9A2RTY3 570 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 CCDC162PA2VCL2 907 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 C9J4A7 227 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 DPM1O60762 260 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 CHRM5P08912 532 aaPredicted RBP11.07□□□□□ -0.64
SCFD1-206ENST00000484733 TPBGLP0DKB5 382 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 PVRP15151 417 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 CHAF1BQ13112 559 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 RHBDD2Q6NTF9 364 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 GPR135Q8IZ08 494 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 CPT1CQ8TCG5 803 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 PEX13Q92968 403 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 SMAD5Q99717 465 aaKnown RBP11.07□□□□□ -0.64
SCFD1-206ENST00000484733 SLC7A5P2Q9GIP4 190 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 RBSNQ9H1K0 784 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 FAM60AQ9NP50 221 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 C5AR2Q9P296 337 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 TCRBV7S2A1N4TA0A589 114 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 VPS4BO75351 444 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 GAS8O95995 478 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 IGHEP01854 428 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 ADRA1DP25100 572 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 VARSP26640 1264 aaKnown RBP11.07□□□□□ -0.64
SCFD1-206ENST00000484733 SSPNQ14714 243 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 KIR2DS3Q14952 304 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 OASLQ15646 514 aaKnown RBP11.07□□□□□ -0.64
SCFD1-206ENST00000484733 ZIC1Q15915 447 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 KYNUQ16719 465 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 DNAJC21Q5F1R6 531 aaKnown RBP11.07□□□□□ -0.64
SCFD1-206ENST00000484733 TSTD2Q5T7W7 516 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 AFTPHQ6ULP2 937 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 NLRP9Q7RTR0 991 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 DNAJC22Q8N4W6 341 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 RNF10Q8N5U6 811 aaKnown RBP11.07□□□□□ -0.64
SCFD1-206ENST00000484733 EFCAB3Q8N7B9 438 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 OR52K1Q8NGK4 314 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 OR13J1Q8NGT2 312 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 PSMG3-AS1Q96PY0 264 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 CARD6Q9BX69 1037 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 VPS4AQ9UN37 437 aa11.07□□□□□ -0.64
SCFD1-206ENST00000484733 PACSIN2Q9UNF0 486 aaPredicted RBP11.07□□□□□ -0.64
SCFD1-206ENST00000484733 TTLL8A6PVC2 850 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 KLHL41O60662 606 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 KLF7O75840 302 aaPredicted RBP11.06□□□□□ -0.64
SCFD1-206ENST00000484733 FTCDO95954 541 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 PPARGP37231 505 aaPredicted RBP11.06□□□□□ -0.64
SCFD1-206ENST00000484733 PTCHD3Q3KNS1 767 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 NADK2Q4G0N4 442 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 TLDC1Q6P9B6 456 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 ETNK1Q9HBU6 452 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 CASS4Q9NQ75 786 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 ENAMQ9NRM1 1142 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 SPHK1Q9NYA1 384 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 SRPK3Q9UPE1 567 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 OR51F1A6NGY5 319 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 LIASO43766 372 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 OR2B3O76000 313 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 GOT2P00505 430 aaKnown RBP11.06□□□□□ -0.64
SCFD1-206ENST00000484733 CBSLP0DN79 551 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 CBSP35520 551 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 SYTL3Q4VX76 610 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 TRIM73Q86UV7 250 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 SLC22A15Q8IZD6 547 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 DNAAF3Q8N9W5 541 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 FDCSPQ8NFU4 85 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 OR4L1Q8NH43 312 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 N4BP2L2Q92802 583 aaPredicted RBP11.06□□□□□ -0.64
SCFD1-206ENST00000484733 HDAC10Q969S8 669 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 GBP5Q96PP8 586 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 NUDT9Q9BW91 350 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 TSSK1BQ9BXA7 367 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 AP1M1Q9BXS5 423 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 SPRTNQ9H040 489 aaPredicted RBP11.06□□□□□ -0.64
SCFD1-206ENST00000484733 KLHL25Q9H0H3 589 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 PIH1D1Q9NWS0 290 aaKnown RBP11.06□□□□□ -0.64
SCFD1-206ENST00000484733 IMPACTQ9P2X3 320 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 PLCL2Q9UPR0 1127 aa11.06□□□□□ -0.64
SCFD1-206ENST00000484733 PCSK5Q92824 1860 aa11.05□□□□□ -0.64
SCFD1-206ENST00000484733 GPC4O75487 556 aa11.05□□□□□ -0.64
SCFD1-206ENST00000484733 ONECUT2O95948 504 aa11.05□□□□□ -0.64
SCFD1-206ENST00000484733 PKLRP30613 574 aa11.05□□□□□ -0.64
SCFD1-206ENST00000484733 GCGRP47871 477 aa11.05□□□□□ -0.64
SCFD1-206ENST00000484733 DCDP81605 110 aaKnown RBP11.05□□□□□ -0.64
SCFD1-206ENST00000484733 JMJD6Q6NYC1 403 aaPredicted RBP11.05□□□□□ -0.64
SCFD1-206ENST00000484733 PPP1R21Q6ZMI0 780 aa11.05□□□□□ -0.64
SCFD1-206ENST00000484733 ZNF534Q76KX8 674 aa11.05□□□□□ -0.64
SCFD1-206ENST00000484733 GPN3Q9UHW5 284 aaPredicted RBP11.05□□□□□ -0.64
SCFD1-206ENST00000484733 TCAF1Q9Y4C2 921 aa11.05□□□□□ -0.64
SCFD1-206ENST00000484733 MED13Q9UHV7 2174 aa11.05□□□□□ -0.64
SCFD1-206ENST00000484733 ZNF185O15231 689 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms