RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 CDKL4Q5MAI5 379 aa19.28■□□□□ 0.68
LIMS2-215ENST00000484252 CHST15Q7LFX5 561 aaPredicted RBP19.28■□□□□ 0.68
LIMS2-215ENST00000484252 GPR149Q86SP6 731 aa19.28■□□□□ 0.68
LIMS2-215ENST00000484252 ADHFE1Q8IWW8 467 aa19.28■□□□□ 0.68
LIMS2-215ENST00000484252 MSRB3Q8IXL7 192 aa19.28■□□□□ 0.68
LIMS2-215ENST00000484252 FAM9CQ8IZT9 166 aa19.28■□□□□ 0.68
LIMS2-215ENST00000484252 FAM86B1Q8N7N1 296 aa19.28■□□□□ 0.68
LIMS2-215ENST00000484252 CCDC97Q96F63 343 aaPredicted RBP19.28■□□□□ 0.68
LIMS2-215ENST00000484252 IL26Q9NPH9 171 aa19.28■□□□□ 0.68
LIMS2-215ENST00000484252 LATS2Q9NRM7 1088 aa19.28■□□□□ 0.68
LIMS2-215ENST00000484252 SLC25A37Q9NYZ2 338 aa19.28■□□□□ 0.68
LIMS2-215ENST00000484252 CRLS1Q9UJA2 301 aa19.28■□□□□ 0.68
LIMS2-215ENST00000484252 ZNF232Q9UNY5 417 aa19.28■□□□□ 0.68
LIMS2-215ENST00000484252 INVSQ9Y283 1065 aa19.28■□□□□ 0.68
LIMS2-215ENST00000484252 TRBV5-3A0A0A0MS03 114 aa19.27■□□□□ 0.68
LIMS2-215ENST00000484252 GLYATL1P3A0A0U1RQE8 302 aa19.27■□□□□ 0.68
LIMS2-215ENST00000484252 C2orf78A6NCI8 922 aa19.27■□□□□ 0.68
LIMS2-215ENST00000484252 GNGT2O14610 69 aa19.27■□□□□ 0.68
LIMS2-215ENST00000484252 SEC24AO95486 1093 aa19.27■□□□□ 0.68
LIMS2-215ENST00000484252 CBSLP0DN79 551 aa19.27■□□□□ 0.68
LIMS2-215ENST00000484252 PORP16435 677 aaPredicted RBP19.27■□□□□ 0.68
LIMS2-215ENST00000484252 RPL17P18621 184 aaKnown RBP19.27■□□□□ 0.68
LIMS2-215ENST00000484252 CBSP35520 551 aa19.27■□□□□ 0.68
LIMS2-215ENST00000484252 CSKP41240 450 aa19.27■□□□□ 0.68
LIMS2-215ENST00000484252 CSNK1DP48730 415 aa19.27■□□□□ 0.68
LIMS2-215ENST00000484252 BCL2L1Q07817 233 aa19.27■□□□□ 0.68
LIMS2-215ENST00000484252 RETSATQ6NUM9 610 aa19.27■□□□□ 0.68
LIMS2-215ENST00000484252 RGL4Q8IZJ4 473 aa19.27■□□□□ 0.68
LIMS2-215ENST00000484252 RAB2BQ8WUD1 216 aa19.27■□□□□ 0.68
LIMS2-215ENST00000484252 ALG14Q96F25 216 aa19.27■□□□□ 0.68
LIMS2-215ENST00000484252 OR52E6Q96RD3 313 aa19.27■□□□□ 0.68
LIMS2-215ENST00000484252 MBOAT4Q96T53 435 aa19.27■□□□□ 0.68
LIMS2-215ENST00000484252 TMEM165Q9HC07 324 aa19.27■□□□□ 0.68
LIMS2-215ENST00000484252 DCAF13Q9NV06 445 aaKnown RBP19.27■□□□□ 0.68
LIMS2-215ENST00000484252 KLHL42Q9P2K6 505 aa19.27■□□□□ 0.68
LIMS2-215ENST00000484252 LOC730098B7Z3J9 87 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 SOCS5O75159 536 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 EFEMP2O95967 443 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 KRT6AP02538 564 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 KRT6BP04259 564 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 GDF5P43026 501 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 KRT6CP48668 564 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 TPD52P55327 224 aaPredicted RBP19.26■□□□□ 0.67
LIMS2-215ENST00000484252 HMGCS1Q01581 520 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 NFATC3Q12968 1075 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 PLD1Q13393 1074 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 BFSP2Q13515 415 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 CDH18Q13634 790 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 NKG7Q16617 165 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 USP39Q53GS9 565 aaKnown RBP19.26■□□□□ 0.67
LIMS2-215ENST00000484252 GRAMD4Q6IC98 578 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 EID3Q8N140 333 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 CBARPQ8N350 705 aaPredicted RBP19.26■□□□□ 0.67
LIMS2-215ENST00000484252 CLDN19Q8N6F1 224 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 OR5K1Q8NHB7 308 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 NAA50Q9GZZ1 169 aaKnown RBP19.26■□□□□ 0.67
LIMS2-215ENST00000484252 IKZF5Q9H5V7 419 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 ZFP14Q9HCL3 533 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 FARSBQ9NSD9 589 aaKnown RBP19.26■□□□□ 0.67
LIMS2-215ENST00000484252 RNF186Q9NXI6 227 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 MAGED1Q9Y5V3 778 aaPredicted RBP19.26■□□□□ 0.67
LIMS2-215ENST00000484252 ARVCFO00192 962 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 STK16O75716 305 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 ALDH1A1P00352 501 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 MATN1P21941 496 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 MAP4P27816 1152 aaKnown RBP19.26■□□□□ 0.67
LIMS2-215ENST00000484252 SPAM1P38567 509 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 PTPN5P54829 565 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 GPNMBQ14956 572 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 MOGQ16653 247 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 CDKN3Q16667 212 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 C6orf141Q5SZD1 244 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 XAF1Q6GPH4 301 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 R3HCC1LQ7Z5L2 792 aaKnown RBP19.26■□□□□ 0.67
LIMS2-215ENST00000484252 CALHM3Q86XJ0 350 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 CRIPAKQ8N1N5 446 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 ZCCHC7Q8N3Z6 543 aaKnown RBP19.26■□□□□ 0.67
LIMS2-215ENST00000484252 SNRNP27Q8WVK2 155 aaKnown RBP19.26■□□□□ 0.67
LIMS2-215ENST00000484252 C2orf49Q9BVC5 232 aaPredicted RBP19.26■□□□□ 0.67
LIMS2-215ENST00000484252 KCNH6Q9H252 994 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 ADNPQ9H2P0 1102 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 KAT8Q9H7Z6 458 aaKnown RBP19.26■□□□□ 0.67
LIMS2-215ENST00000484252 GPN2Q9H9Y4 310 aaPredicted RBP19.26■□□□□ 0.67
LIMS2-215ENST00000484252 SMURF2Q9HAU4 748 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 C3orf18Q9UK00 162 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 MAN2B2Q9Y2E5 1009 aa19.26■□□□□ 0.67
LIMS2-215ENST00000484252 A0A096LPI6 279 aa19.25■□□□□ 0.67
LIMS2-215ENST00000484252 CREG1O75629 220 aa19.25■□□□□ 0.67
LIMS2-215ENST00000484252 RECQL5O94762 991 aaPredicted RBP19.25■□□□□ 0.67
LIMS2-215ENST00000484252 PRKD3O94806 890 aa19.25■□□□□ 0.67
LIMS2-215ENST00000484252 CLDN9O95484 217 aa19.25■□□□□ 0.67
LIMS2-215ENST00000484252 CA5AP35218 305 aa19.25■□□□□ 0.67
LIMS2-215ENST00000484252 SMAD3P84022 425 aaKnown RBP19.25■□□□□ 0.67
LIMS2-215ENST00000484252 VEPH1Q14D04 833 aa19.25■□□□□ 0.67
LIMS2-215ENST00000484252 PON2Q15165 354 aa19.25■□□□□ 0.67
LIMS2-215ENST00000484252 RFX4Q33E94 735 aa19.25■□□□□ 0.67
LIMS2-215ENST00000484252 LRIF1Q5T3J3 769 aa19.25■□□□□ 0.67
LIMS2-215ENST00000484252 ANKRD26P1Q6NSI1 321 aa19.25■□□□□ 0.67
LIMS2-215ENST00000484252 PLPP6Q8IY26 295 aa19.25■□□□□ 0.67
LIMS2-215ENST00000484252 ZNF461Q8TAF7 563 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms