RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 CCNYL1Q8N7R7 359 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 CCL4L1Q8NHW4 92 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 STAG3L4Q8TBR4 150 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 LMX1AQ8TE12 382 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 LPGAT1Q92604 370 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 KCNJ9Q92806 393 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 SCAMP4Q969E2 229 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 SKA1Q96BD8 255 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 NUS1Q96E22 293 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 SCRN2Q96FV2 425 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 FAR2Q96K12 515 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 CNDP1Q96KN2 507 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 UBXN10Q96LJ8 280 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 GPR78Q96P69 363 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 LYSMD1Q96S90 227 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 LRRC61Q9BV99 259 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 CLPBQ9H078 707 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 CDH19Q9H159 772 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 ABCG8Q9H221 673 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 RASSF4Q9H2L5 321 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 TFB2MQ9H5Q4 396 aaKnown RBP6.8□□□□□ -1.32
BRCA1-216ENST00000484087 ASB8Q9H765 288 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 KCNK13Q9HB14 408 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 FGF22Q9HCT0 170 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 RAD18Q9NS91 495 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 IGSF5Q9NSI5 407 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 APOBEC3BQ9UH17 382 aaKnown RBP6.8□□□□□ -1.32
BRCA1-216ENST00000484087 CRLS1Q9UJA2 301 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 GNPTGQ9UJJ9 305 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 TMCO1Q9UM00 188 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 TRIM33Q9UPN9 1127 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-216ENST00000484087 RAP2CQ9Y3L5 183 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 PCYT1BQ9Y5K3 369 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-216ENST00000484087 U3KQA8 63 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 KMT2BQ9UMN6 2715 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-216ENST00000484087 GOLGA8QA0A0J9YX86 632 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 GLYATL1P3A0A0U1RQE8 302 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 GOLGA8OA6NCC3 632 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 TARM1B6A8C7 271 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 GOLGA8NF8WBI6 632 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 PRMT5O14744 637 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 HDAC3O15379 428 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 GPR39O43194 453 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ITM2AO43736 263 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 DLX3O60479 287 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 WFS1O76024 890 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 IPO13O94829 963 aaKnown RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 CLDN7O95471 211 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 PRAMEF1O95521 474 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 LDOC1O95751 146 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 SERPINA6P08185 405 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ESRRAP11474 423 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 EZRP15311 586 aaKnown RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 NME1P15531 152 aaKnown RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 CD1DP15813 335 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ZNF37AP17032 561 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ZNF30P17039 623 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 CALB2P22676 271 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 VIPR1P32241 457 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 RABIFP47224 123 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ACADVLP49748 655 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 THOP1P52888 689 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 INSM1Q01101 510 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 DLG1Q12959 904 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 PEX6Q13608 980 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ZRSR2Q15696 482 aaKnown RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 CDKN3Q16667 212 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 KIF26BQ2KJY2 2108 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 PRRT3Q5FWE3 981 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ZNF648Q5T619 568 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ZNF549Q6P9A3 640 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 FAM151BQ6UXP7 276 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ACAD11Q709F0 780 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 IQCHQ86VS3 1027 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 DEPDC4Q8N2C3 294 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 SPATA6LQ8N4H0 392 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 DENND6BQ8NEG7 585 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 OR6Y1Q8NGX8 325 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 RHEBL1Q8TAI7 183 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 NAT14Q8WUY8 206 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 OR1E3Q8WZA6 343 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 INPP5DQ92835 1189 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 SGF29Q96ES7 293 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 NSL1Q96IY1 281 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 COQ10AQ96MF6 247 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 TRMOQ9BU70 441 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 APOOQ9BUR5 198 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 C20orf27Q9GZN8 174 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 DERL2Q9GZP9 239 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ALG9Q9H6U8 611 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ZNF395Q9H8N7 513 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 MRGBPQ9NV56 204 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 PNPOQ9NVS9 261 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 PKD2L2Q9NZM6 624 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 MOSPD1Q9UJG1 213 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 RNF112Q9ULX5 631 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 PPIL1Q9Y3C6 166 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 PLEKHM1Q9Y4G2 1056 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms