RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 RPS6KA2Q15349 733 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 COQ5Q5HYK3 327 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 PDE12Q6L8Q7 609 aaKnown RBP14.13□□□□□ -0.15
CHD3-211ENST00000481999 SYCE2Q6PIF2 218 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 TXNDC11Q6PKC3 985 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 IL27RAQ6UWB1 636 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 B3GNT6Q6ZMB0 384 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 TDHQ8IZJ6 230 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 ANKFN1Q8N957 763 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 PDPRQ8NCN5 879 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 FGF14Q92915 247 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 HAUS8Q9BT25 410 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 GID8Q9NWU2 228 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 MAP10Q9P2G4 905 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 DMTF1Q9Y222 760 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 RNF11Q9Y3C5 154 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 AK5Q9Y6K8 562 aa14.13□□□□□ -0.15
CHD3-211ENST00000481999 AQP12BA6NM10 295 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 ZNF839A8K0R7 811 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 BMP2P12643 396 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 IDO1P14902 403 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 TCF3P15923 654 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 AOAHP28039 575 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 GRIA3P42263 894 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 IL12RB1P42701 662 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 RPIAP49247 311 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 NAA20P61599 178 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 BNIP2Q12982 314 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 CAPRIN1Q14444 709 aaKnown RBP14.12□□□□□ -0.15
CHD3-211ENST00000481999 SPATS1Q496A3 300 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 CARM1Q86X55 608 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 AQP12AQ8IXF9 295 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 GOLM1Q8NBJ4 401 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 CIB1Q99828 191 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 P2RY13Q9BPV8 354 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 RBM38Q9H0Z9 239 aaKnown RBP14.12□□□□□ -0.15
CHD3-211ENST00000481999 ARL15Q9NXU5 204 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 SLAMF8Q9P0V8 285 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 TRIOBPQ9H2D6 2365 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 ARHGAP10A1A4S6 786 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 NME4O00746 187 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 GIPC1O14908 333 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 TSPAN6O43657 245 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 MLYCDO95822 493 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 UROSP10746 265 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 HSD17B1P14061 328 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 ATP6V1B2P21281 511 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 UFM1P61960 85 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 HMGCS1Q01581 520 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 FOXM1Q08050 763 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 INPP5AQ14642 412 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 CCSMST1Q4G0I0 132 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 HMBOX1Q6NT76 420 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 BORAQ6PGQ7 559 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 ZBTB49Q6ZSB9 765 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 ERMP1Q7Z2K6 904 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 AMIGO2Q86SJ2 522 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 SFRP1Q8N474 314 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 RNF175Q8N4F7 328 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 RASGEF1AQ8N9B8 481 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 CANT1Q8WVQ1 401 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 ELMO1Q92556 727 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 AP2M1Q96CW1 435 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 DTNBP1Q96EV8 351 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 ZNF382Q96SR6 550 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 ATG10Q9H0Y0 220 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 CCM2LQ9NUG4 571 aaPredicted RBP14.12□□□□□ -0.15
CHD3-211ENST00000481999 THEGQ9P2T0 379 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 COLQQ9Y215 455 aaPredicted RBP14.12□□□□□ -0.15
CHD3-211ENST00000481999 PLXNA2O75051 1894 aa14.12□□□□□ -0.15
CHD3-211ENST00000481999 ZFC3H1O60293 1989 aaKnown RBP14.12□□□□□ -0.15
CHD3-211ENST00000481999 CCDC160A6NGH7 325 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 AKAP10O43572 662 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 MMP20O60882 483 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 TIPRLO75663 272 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 OR56A5P0C7T3 313 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 EPORP19235 508 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 OPRD1P41143 372 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 PCBP2Q15366 365 aaKnown RBP eCLIP14.11□□□□□ -0.151e-8■■■■■ 37.4
CHD3-211ENST00000481999 XKR7Q5GH72 579 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 PRPF38BQ5VTL8 546 aaKnown RBP14.11□□□□□ -0.15
CHD3-211ENST00000481999 PPP4R4Q6NUP7 873 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 PARM1Q6UWI2 310 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 UBE2R2Q712K3 238 aaPredicted RBP14.11□□□□□ -0.15
CHD3-211ENST00000481999 TECPR1Q7Z6L1 1165 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 TSPAN14Q8NG11 270 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 TSPEARQ8WU66 669 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 MYADMQ96S97 322 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 SLC29A1Q99808 456 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 DPP7Q9UHL4 492 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 SLC8A2Q9UPR5 921 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 SLC27A6Q9Y2P4 619 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 PCYT1BQ9Y5K3 369 aaPredicted RBP14.11□□□□□ -0.15
CHD3-211ENST00000481999 MYOCOSA0A1B0GUC4 107 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 LOC730098B7Z3J9 87 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 FXYD1O00168 92 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 HNRNPRO43390 633 aaKnown RBP14.11□□□□□ -0.15
CHD3-211ENST00000481999 NFATC1O95644 943 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 S100BP04271 92 aaPredicted RBP14.11□□□□□ -0.15
CHD3-211ENST00000481999 CYP2A6P11509 494 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms