RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	AACS	Q86V21	672 aa		2.73	□□□□□ -1.97
CCNL1-223	ENST00000481173	COMMD2	Q86X83	199 aa		2.73	□□□□□ -1.97
CCNL1-223	ENST00000481173	TMEM139	Q8IV31	216 aa		2.73	□□□□□ -1.97
CCNL1-223	ENST00000481173	CFAP206	Q8IYR0	622 aa		2.73	□□□□□ -1.97
CCNL1-223	ENST00000481173	ABCA7	Q8IZY2	2146 aa		2.73	□□□□□ -1.97
CCNL1-223	ENST00000481173	EID3	Q8N140	333 aa		2.73	□□□□□ -1.97
CCNL1-223	ENST00000481173	OR5AP2	Q8NGF4	316 aa		2.73	□□□□□ -1.97
CCNL1-223	ENST00000481173	DYRK2	Q92630	601 aa		2.73	□□□□□ -1.97
CCNL1-223	ENST00000481173	FNBP1	Q96RU3	617 aa		2.73	□□□□□ -1.97
CCNL1-223	ENST00000481173	LRRC61	Q9BV99	259 aa		2.73	□□□□□ -1.97
CCNL1-223	ENST00000481173	FNDC11	Q9BVV2	318 aa		2.73	□□□□□ -1.97
CCNL1-223	ENST00000481173	DGCR6L	Q9BY27	220 aa		2.73	□□□□□ -1.97
CCNL1-223	ENST00000481173	KRT84	Q9NSB2	600 aa		2.73	□□□□□ -1.97
CCNL1-223	ENST00000481173	ZDHHC2	Q9UIJ5	367 aa		2.73	□□□□□ -1.97
CCNL1-223	ENST00000481173	KLK13	Q9UKR3	277 aa		2.73	□□□□□ -1.97
CCNL1-223	ENST00000481173	MTUS1	Q9ULD2	1270 aa		2.73	□□□□□ -1.97
CCNL1-223	ENST00000481173	EXO1	Q9UQ84	846 aa	Known RBP	2.73	□□□□□ -1.97
CCNL1-223	ENST00000481173		A8MU10	97 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	RTL8C	O15255	209 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	MAGEC1	O60732	1142 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	NXPH2	O95156	264 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	CAPN2	P17655	700 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	UGT1A4	P22310	534 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	CA6	P23280	308 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	HADHA	P40939	763 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	GARS	P41250	739 aa	Known RBP	2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	GSDMD	P57764	484 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	COX10	Q12887	443 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	RAPSN	Q13702	412 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	HLA-B	Q31612	363 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	GLIPR1L2	Q4G1C9	344 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	C2CD6	Q53TS8	623 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	XKR3	Q5GH77	459 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	FIGLA	Q6QHK4	219 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	GPRIN3	Q6ZVF9	776 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	MCEMP1	Q8IX19	187 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	EXOC8	Q8IYI6	725 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	TRIML1	Q8N9V2	468 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	IRGQ	Q8WZA9	623 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	CEP295NL	Q96MC4	621 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	NUP85	Q9BW27	656 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	DPAGT1	Q9H3H5	408 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	HRH4	Q9H3N8	390 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	EIF2B3	Q9NR50	452 aa	Known RBP	2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	NUDT4	Q9NZJ9	180 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	LARS	Q9P2J5	1176 aa	Known RBP	2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	CACNG4	Q9UBN1	327 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	HACL1	Q9UJ83	578 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	TUBE1	Q9UJT0	475 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	PPP1R3C	Q9UQK1	317 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	CSAG2	Q9Y5P2	127 aa		2.72	□□□□□ -1.97
CCNL1-223	ENST00000481173	ANKRD61	A6NGH8	418 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	LRRC72	A6NJI9	287 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	PTGES3L	E9PB15	166 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	USO1	O60763	962 aa	Known RBP	2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	MITF	O75030	526 aa	Predicted RBP	2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	CREG1	O75629	220 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	MBD4	O95243	580 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	MMP12	P39900	470 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	LEPR	P48357	1165 aa	Known RBP	2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	PDX1	P52945	283 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	PAX9	P55771	341 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	KRTAP10-1	P60331	282 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	MS4A2	Q01362	244 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	IRF3	Q14653	427 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	ITPRIPL2	Q3MIP1	535 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	SLC25A53	Q5H9E4	307 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	WLS	Q5T9L3	541 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	LDB1	Q86U70	411 aa	Predicted RBP	2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	RTN4RL2	Q86UN3	420 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	CDC20B	Q86Y33	519 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	KIRREL3	Q8IZU9	778 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	ARHGAP24	Q8N264	748 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	MARVELD2	Q8N4S9	558 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	TTC39C	Q8N584	583 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	NIPA2	Q8N8Q9	360 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	LRRC59	Q96AG4	307 aa	Known RBP	2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	GPATCH1	Q9BRR8	931 aa	Known RBP	2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	RTN4R	Q9BZR6	473 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	UNC45A	Q9H3U1	944 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	SMARCAD1	Q9H4L7	1026 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	SPHK2	Q9NRA0	654 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	ZNF701	Q9NV72	531 aa	Predicted RBP	2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	THEG	Q9P2T0	379 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	B3GAT1	Q9P2W7	334 aa		2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	2.71	□□□□□ -1.98
CCNL1-223	ENST00000481173	ADAMTS9	Q9P2N4	1935 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	CCDC189	A1A4V9	331 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	PI4KAP2	A4QPH2	592 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	PGPEP1L	A6NFU8	196 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	SOCS3	O14543	225 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	DFFB	O76075	338 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	ACADM	P11310	421 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	TM4SF1	P30408	202 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	MFAP4	P55083	255 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	LCE1C	Q5T751	118 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	LCE1B	Q5T7P3	118 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	CCDC30	Q5VVM6	783 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	FIP1L1	Q6UN15	594 aa	Known RBP	2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	BTN2A1	Q7KYR7	527 aa		2.7	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms