RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 ICKQ9UPZ9 632 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 PCDHB3Q9Y5E6 796 aa9.98□□□□□ -0.81
HDAC6-222ENST00000478095 MN1Q10571 1320 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-222ENST00000478095 ARHGEF17Q96PE2 2063 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-222ENST00000478095 TMX2-CTNND1H3BSU7 103 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 BTN3A3O00478 584 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 BTN3A1O00481 513 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 TNFSF15O95150 251 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 C9P02748 559 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 SAT1P21673 171 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 CSTF2P33240 577 aaKnown RBP eCLIP9.97□□□□□ -0.81
HDAC6-222ENST00000478095 ETV5P41161 510 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 LSSP48449 732 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 MAPK10P53779 464 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 TIAL1Q01085 375 aaKnown RBP eCLIP9.97□□□□□ -0.813e-9■□□□□ 10.5
HDAC6-222ENST00000478095 TRA2AQ13595 282 aaKnown RBP eCLIP9.97□□□□□ -0.81
HDAC6-222ENST00000478095 GBX1Q14549 363 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 RTP5Q14D33 572 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 EFTUD2Q15029 972 aaKnown RBP eCLIP9.97□□□□□ -0.813e-13■■■■■ 30.6
HDAC6-222ENST00000478095 KYNUQ16719 465 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 KLHL38Q2WGJ6 581 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 TTLL9Q3SXZ7 439 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 CCSMST1Q4G0I0 132 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 HECTD2Q5U5R9 776 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 CACHD1Q5VU97 1274 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 ARMC6Q6NXE6 501 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 KLHL35Q6PF15 583 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 FBXO38Q6PIJ6 1188 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 UNC5DQ6UXZ4 953 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 PIWIL4Q7Z3Z4 852 aaKnown RBP9.97□□□□□ -0.81
HDAC6-222ENST00000478095 TAX1BP1Q86VP1 789 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 ZC3HC1Q86WB0 502 aaKnown RBP9.97□□□□□ -0.81
HDAC6-222ENST00000478095 AMIGO1Q86WK6 493 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 DCUN1D3Q8IWE4 304 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 CTAGE3PQ8IX95 158 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 C2orf73Q8N5S3 287 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-222ENST00000478095 FBF1Q8TES7 1133 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 ZCCHC14Q8WYQ9 949 aaKnown RBP9.97□□□□□ -0.81
HDAC6-222ENST00000478095 ZDHHC12Q96GR4 267 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 PRR11Q96HE9 360 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-222ENST00000478095 ELMO2Q96JJ3 720 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 PPM1MQ96MI6 270 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 FMO2Q99518 471 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 OLFM1Q99784 485 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 TFB2MQ9H5Q4 396 aaKnown RBP9.97□□□□□ -0.81
HDAC6-222ENST00000478095 LATS2Q9NRM7 1088 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 OCIAD1Q9NX40 245 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 NINJ2Q9NZG7 142 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 AKAP7Q9P0M2 348 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-222ENST00000478095 PDP2Q9P2J9 529 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 TRMT6Q9UJA5 497 aaKnown RBP9.97□□□□□ -0.81
HDAC6-222ENST00000478095 NFU1Q9UMS0 254 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 DHRS7Q9Y394 339 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 COMMD10Q9Y6G5 202 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 RP1P56715 2156 aa9.97□□□□□ -0.81
HDAC6-222ENST00000478095 CEP295Q9C0D2 2601 aa9.96□□□□□ -0.81
HDAC6-222ENST00000478095 FAM159BA6NKW6 160 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 EFCAB7A8K855 629 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 HGSO14964 777 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-222ENST00000478095 C1orf105O95561 183 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 C1QAP02745 245 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 RBMS1P29558 406 aaKnown RBP9.96□□□□□ -0.82
HDAC6-222ENST00000478095 ATP5DP30049 168 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 STX2P32856 288 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 SHMT2P34897 504 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 KPNA2P52292 529 aaKnown RBP9.96□□□□□ -0.82
HDAC6-222ENST00000478095 PRKAA1Q13131 559 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 EIF3IQ13347 325 aaKnown RBP9.96□□□□□ -0.82
HDAC6-222ENST00000478095 GRB7Q14451 532 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 KBTBD12Q3ZCT8 623 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.96□□□□□ -0.82
HDAC6-222ENST00000478095 FAM45BPQ6NSW5 357 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 PAQR3Q6TCH7 311 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 ARHGAP22Q7Z5H3 698 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 GALNT7Q86SF2 657 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 TRIM73Q86UV7 250 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 SLC26A11Q86WA9 606 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 IFT20Q8IY31 132 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 GSPT2Q8IYD1 628 aaKnown RBP9.96□□□□□ -0.82
HDAC6-222ENST00000478095 ADGRF3Q8IZF5 1079 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 PPM1NQ8N819 430 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 AGBL5Q8NDL9 886 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 FAM45AQ8TCE6 357 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 CDKL2Q92772 493 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 INPP5DQ92835 1189 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 PMEPA1Q969W9 287 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 MRRFQ96E11 262 aaKnown RBP9.96□□□□□ -0.82
HDAC6-222ENST00000478095 RNF31Q96EP0 1072 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 FOPNLQ96NB1 174 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 MAP3K3Q99759 626 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 FAM129AQ9BZQ8 928 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 KLHL25Q9H0H3 589 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 SPHK1Q9NYA1 384 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 TAS2R13Q9NYV9 303 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 TXNDC16Q9P2K2 825 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 EPHA6Q9UF33 1036 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 POLG2Q9UHN1 485 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 PCDHGA8Q9Y5G5 932 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 FRYQ5TBA9 3013 aa9.96□□□□□ -0.82
HDAC6-222ENST00000478095 COL27A1Q8IZC6 1860 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms