RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 RPTNQ6XPR3 784 aa19.5■□□□□ 0.71
PDLIM1-202ENST00000477757 MRGPRGQ86SM5 289 aa19.5■□□□□ 0.71
PDLIM1-202ENST00000477757 NR4A3Q92570 626 aa19.5■□□□□ 0.71
PDLIM1-202ENST00000477757 MRGPRX2Q96LB1 330 aa19.5■□□□□ 0.71
PDLIM1-202ENST00000477757 NDC1Q9BTX1 674 aa19.5■□□□□ 0.71
PDLIM1-202ENST00000477757 A0A087X0T9 212 aa19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 C17orf113A0A1B0GUU1 675 aa19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 C3orf70A6NLC5 250 aaPredicted RBP19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 STX7O15400 261 aaKnown RBP19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 FAM228BP0C875 321 aa19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 NFKB1P19838 968 aa19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 ITGAXP20702 1163 aa19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 GCGRP47871 477 aa19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 PTPRCAPQ14761 206 aa19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 TUBB8Q3ZCM7 444 aa19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 ZNF658BQ4V348 819 aaPredicted RBP19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 VWA2Q5GFL6 755 aa19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 MTFR2Q6P444 385 aa19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 SASS6Q6UVJ0 657 aa19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 KIRREL2Q6UWL6 708 aa19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 ZNF295-AS1Q8N0V1 137 aa19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 DCUN1D1Q96GG9 259 aa19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 OXNAD1Q96HP4 312 aaPredicted RBP19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 SPSB2Q99619 263 aa19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 ICKQ9UPZ9 632 aa19.49■□□□□ 0.71
PDLIM1-202ENST00000477757 SRP72O76094 671 aaKnown RBP19.48■□□□□ 0.71
PDLIM1-202ENST00000477757 RALBP11234 206 aa19.48■□□□□ 0.71
PDLIM1-202ENST00000477757 TMPRSS15P98073 1019 aa19.48■□□□□ 0.71
PDLIM1-202ENST00000477757 LINC00696Q6ZRV3 163 aa19.48■□□□□ 0.71
PDLIM1-202ENST00000477757 PHC3Q8NDX5 983 aa19.48■□□□□ 0.71
PDLIM1-202ENST00000477757 CATSPER1Q8NEC5 780 aa19.48■□□□□ 0.71
PDLIM1-202ENST00000477757 FLVCR1-AS1Q8TAF5 88 aa19.48■□□□□ 0.71
PDLIM1-202ENST00000477757 OR2A14Q96R47 310 aa19.48■□□□□ 0.71
PDLIM1-202ENST00000477757 TAAR6Q96RI8 345 aa19.48■□□□□ 0.71
PDLIM1-202ENST00000477757 SLC26A1Q9H2B4 701 aa19.48■□□□□ 0.71
PDLIM1-202ENST00000477757 ASB8Q9H765 288 aa19.48■□□□□ 0.71
PDLIM1-202ENST00000477757 IRAK4Q9NWZ3 460 aa19.48■□□□□ 0.71
PDLIM1-202ENST00000477757 CTTNBP2NLQ9P2B4 639 aa19.48■□□□□ 0.71
PDLIM1-202ENST00000477757 UVRAGQ9P2Y5 699 aa19.48■□□□□ 0.71
PDLIM1-202ENST00000477757 LCMT1Q9UIC8 334 aa19.48■□□□□ 0.71
PDLIM1-202ENST00000477757 TRGV8A0A0C4DH27 118 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 A0A0J9YY10 115 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 A0A1B0GX78 115 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 AGAP14A8MT82 685 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 ONECUT2O95948 504 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 ALBP02768 609 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 ZFXP17010 805 aaPredicted RBP19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 SSTR2P30874 369 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 SHMT2P34897 504 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 Q0VFX4 171 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 WASHC5Q12768 1159 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 PRKG2Q13237 762 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 FIGNQ5HY92 759 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 ALKBH5Q6P6C2 394 aaKnown RBP19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 GFRALQ6UXV0 394 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 OVCH1Q7RTY7 1134 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 DNAJC22Q8N4W6 341 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 IPMKQ8NFU5 416 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 DLG3Q92796 817 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 POM121Q96HA1 1249 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 THOC3Q96J01 351 aaKnown RBP19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 MAGEB10Q96LZ2 347 aaPredicted RBP19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 LMF1Q96S06 567 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 FKBPLQ9UIM3 349 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 ARL5AQ9Y689 179 aa19.47■□□□□ 0.71
PDLIM1-202ENST00000477757 DNHD1Q96M86 4753 aa19.46■□□□□ 0.71
PDLIM1-202ENST00000477757 CCL21O00585 134 aa19.46■□□□□ 0.71
PDLIM1-202ENST00000477757 CA7P43166 264 aa19.46■□□□□ 0.71
PDLIM1-202ENST00000477757 RPA4Q13156 261 aa19.46■□□□□ 0.71
PDLIM1-202ENST00000477757 NKG7Q16617 165 aa19.46■□□□□ 0.71
PDLIM1-202ENST00000477757 SLC5A12Q1EHB4 618 aa19.46■□□□□ 0.71
PDLIM1-202ENST00000477757 FILIP1LQ4L180 1135 aa19.46■□□□□ 0.71
PDLIM1-202ENST00000477757 OR11G2Q8NGC1 345 aa19.46■□□□□ 0.71
PDLIM1-202ENST00000477757 OR1N1Q8NGS0 311 aa19.46■□□□□ 0.71
PDLIM1-202ENST00000477757 TFGQ92734 400 aaPredicted RBP19.46■□□□□ 0.71
PDLIM1-202ENST00000477757 SYN2Q92777 582 aaPredicted RBP19.46■□□□□ 0.71
PDLIM1-202ENST00000477757 VPS50Q96JG6 964 aa19.46■□□□□ 0.71
PDLIM1-202ENST00000477757 FCRL5Q96RD9 977 aa19.46■□□□□ 0.71
PDLIM1-202ENST00000477757 MAK16Q9BXY0 300 aaKnown RBP19.46■□□□□ 0.71
PDLIM1-202ENST00000477757 CRLS1Q9UJA2 301 aa19.46■□□□□ 0.71
PDLIM1-202ENST00000477757 NXT1Q9UKK6 140 aaKnown RBP19.46■□□□□ 0.71
PDLIM1-202ENST00000477757 NENFQ9UMX5 172 aa19.46■□□□□ 0.71
PDLIM1-202ENST00000477757 PLCL2Q9UPR0 1127 aa19.46■□□□□ 0.71
PDLIM1-202ENST00000477757 CFAP99D6REC4 459 aa19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 KCNN4O15554 427 aa19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 KLHL18O94889 574 aa19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 SERPING1P05155 500 aa19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 CHRM5P08912 532 aaPredicted RBP19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 PDHA2P29803 388 aa19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 XIAPP98170 497 aa19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 MPP3Q13368 585 aa19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 RBBP7Q16576 425 aa19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 TMEM207Q6UWW9 146 aa19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 UNC5AQ6ZN44 842 aa19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 COX15Q7KZN9 410 aa19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 OR4K2Q8NGD2 314 aa19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 CPLX3Q8WVH0 158 aa19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 ULK4Q96C45 1275 aa19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 COPS8Q99627 209 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms