RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 VPS39Q96JC1 886 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 EPB41L1Q9H4G0 881 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 UGT1A7Q9HAW7 530 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 UGT1A10Q9HAW8 530 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 UGT1A8Q9HAW9 530 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 CPNE5Q9HCH3 593 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 ZNF624Q9P2J8 865 aaPredicted RBP15.28■□□□□ 0.04
CPSF3-203ENST00000475482 PCDHGA3Q9Y5H0 932 aa15.28■□□□□ 0.04
CPSF3-203ENST00000475482 PRAMEF33A0A0G2JMD5 474 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 GLYATL1P3A0A0U1RQE8 302 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 A0A1W2PPM1 405 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 TK2O00142 265 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 ATXN7O15265 892 aaPredicted RBP15.27■□□□□ 0.04
CPSF3-203ENST00000475482 TM9SF1O15321 606 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 EFSO43281 561 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 DUX1O43812 170 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 KALRNO60229 2985 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 SNX2O60749 519 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 PRAMEF10O60809 474 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 ZWINTO95229 277 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 AHSGP02765 367 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 UGT1A6P19224 532 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 ITGALP20701 1170 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 UGT1A1P22309 533 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 UGT1A4P22310 534 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 CD82P27701 267 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 TYK2P29597 1187 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 MC4RP32245 332 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 UGT1A3P35503 534 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 SLC19A1P41440 591 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 CCT5P48643 541 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 CACNG1Q06432 222 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 VAC14Q08AM6 782 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 DMPKQ09013 629 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 CTBP1Q13363 440 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 ITGA9Q13797 1035 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 BMPR2Q13873 1038 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 ZRANB3Q5FWF4 1079 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 LDLRAP1Q5SW96 308 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 FAM151BQ6UXP7 276 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 CCDC91Q7Z6B0 441 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 LCA5Q86VQ0 697 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 DENND6AQ8IWF6 608 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 AGBL5Q8NDL9 886 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 GPR22Q99680 433 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.27■□□□□ 0.04
CPSF3-203ENST00000475482 STN1Q9H668 368 aaKnown RBP15.27■□□□□ 0.04
CPSF3-203ENST00000475482 MKS1Q9NXB0 559 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 FOXJ2Q9P0K8 574 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 AKAP7Q9P0M2 348 aaPredicted RBP15.27■□□□□ 0.04
CPSF3-203ENST00000475482 FKBPLQ9UIM3 349 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 ADAM21Q9UKJ8 722 aa15.27■□□□□ 0.04
CPSF3-203ENST00000475482 DNMT3AQ9Y6K1 912 aaPredicted RBP15.27■□□□□ 0.04
CPSF3-203ENST00000475482 TMEM120BA0PK00 339 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 COPEO14579 308 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 GPR39O43194 453 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 NDUFS3O75489 264 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 LIPCP11150 499 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 ATP1A2P50993 1020 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 CTSCP53634 463 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 XIAPP98170 497 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 POU4F1Q01851 419 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 SLC18A2Q05940 514 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 NFATC2Q13469 925 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 PTPRCAPQ14761 206 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 INSCQ1MX18 579 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 TYSND1Q2T9J0 566 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 GPR33Q49SQ1 333 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 TAF1BQ53T94 588 aaPredicted RBP15.26■□□□□ 0.03
CPSF3-203ENST00000475482 GPRC6AQ5T6X5 926 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 TMEM26Q6ZUK4 368 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 C4orf33Q8N1A6 199 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 BMPERQ8N8U9 685 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 RASGEF1AQ8N9B8 481 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 ISL2Q96A47 359 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 APOPT1Q96IL0 206 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 TSNARE1Q96NA8 513 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 TAAR9Q96RI9 348 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 MCMBPQ9BTE3 642 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 CCDC68Q9H2F9 335 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 INTS9Q9NV88 658 aaKnown RBP15.26■□□□□ 0.03
CPSF3-203ENST00000475482 SLC17A6Q9P2U8 582 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 TLK1Q9UKI8 766 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 COMMD10Q9Y6G5 202 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 PIKFYVEQ9Y2I7 2098 aa15.26■□□□□ 0.03
CPSF3-203ENST00000475482 MN1Q10571 1320 aaPredicted RBP15.25■□□□□ 0.03
CPSF3-203ENST00000475482 B4E171 279 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 CCL22O00626 93 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 RRP9O43818 475 aaKnown RBP15.25■□□□□ 0.03
CPSF3-203ENST00000475482 RFPL1O75677 317 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 SRP72O76094 671 aaKnown RBP15.25■□□□□ 0.03
CPSF3-203ENST00000475482 S1PR4O95977 384 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 PYGBP11216 843 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 STMN1P16949 149 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 MPSTP25325 297 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 CRABP2P29373 138 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 FOXN2P32314 431 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 CCNFP41002 786 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 TSPAN7P41732 249 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 MAPK10P53779 464 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms