RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 CNSTQ6PJW8 725 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 ANKMY2Q8IV38 441 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 LMNTD2Q8IXW0 634 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 LMNTD1Q8N9Z9 388 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 GIMAP7Q8NHV1 300 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 CHD6Q8TD26 2715 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 CALML6Q8TD86 181 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 CERS2Q96G23 380 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 OR6C1Q96RD1 312 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 NAT9Q9BTE0 207 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 MENTQ9BUN1 341 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 ASPSCR1Q9BZE9 553 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 TWSG1Q9GZX9 223 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 CPNE5Q9HCH3 593 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 GRHL1Q9NZI5 618 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 POLG2Q9UHN1 485 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 CDC23Q9UJX2 597 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 VPS9D1Q9Y2B5 631 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 KRT87PA6NCN2 255 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 E7ESA3 106 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 STMND1H3BQB6 276 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 KPNA5O15131 536 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 POLR1CO15160 346 aaPredicted RBP18.35■□□□□ 0.53
PTCD3-210ENST00000473829 HAUS5O94927 633 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 EBLN1P0CF75 366 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 FOLR1P15328 257 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 CHRM3P20309 590 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 GABRB3P28472 473 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 PRDX3P30048 256 aaKnown RBP18.35■□□□□ 0.53
PTCD3-210ENST00000473829 SHMT2P34897 504 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 BDKRB1P46663 353 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 CLCN7P51798 805 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 UNC5DQ6UXZ4 953 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 CEACAM20Q6UY09 585 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 MAATS1Q7Z4T9 603 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 ZBTB2Q8N680 514 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 C2CD4AQ8NCU7 369 aaPredicted RBP18.35■□□□□ 0.53
PTCD3-210ENST00000473829 LRRC39Q96DD0 335 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 SPRY4Q9C004 299 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 PRORYQ9H606 182 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 LATS2Q9NRM7 1088 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 SPHK1Q9NYA1 384 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 ACTR10Q9NZ32 417 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 ZC3H7BQ9UGR2 993 aaKnown RBP18.35■□□□□ 0.53
PTCD3-210ENST00000473829 ZFYVE26Q68DK2 2539 aa18.35■□□□□ 0.53
PTCD3-210ENST00000473829 E5RI56 91 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 MATN2O00339 956 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 URI1O94763 535 aaPredicted RBP18.34■□□□□ 0.53
PTCD3-210ENST00000473829 CHRM5P08912 532 aaPredicted RBP18.34■□□□□ 0.53
PTCD3-210ENST00000473829 PVRP15151 417 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 ZNF28P17035 718 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 CDH3P22223 829 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 PEBP1P30086 187 aaKnown RBP18.34■□□□□ 0.53
PTCD3-210ENST00000473829 PKLRP30613 574 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 PDIA2Q13087 525 aaKnown RBP18.34■□□□□ 0.53
PTCD3-210ENST00000473829 CCSMST1Q4G0I0 132 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 ACSBG2Q5FVE4 666 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 TRIM73Q86UV7 250 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 VASH2Q86V25 355 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 KMT5CQ86Y97 462 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 DCUN1D3Q8IWE4 304 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 CNTN4Q8IWV2 1026 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 D2HGDHQ8N465 521 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 LINC01555Q8NAE3 123 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 SIDT2Q8NBJ9 832 aaKnown RBP18.34■□□□□ 0.53
PTCD3-210ENST00000473829 FBXO36Q8NEA4 188 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 FLVCR1-AS1Q8TAF5 88 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 ZNF592Q92610 1267 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 ELMO2Q96JJ3 720 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 IL17FQ96PD4 163 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 TEFMQ96QE5 360 aaKnown RBP18.34■□□□□ 0.53
PTCD3-210ENST00000473829 PITPNM3Q9BZ71 974 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 WDR70Q9NW82 654 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 WHRNQ9P202 907 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 PILRAQ9UKJ1 303 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 MGAQ8IWI9 3026 aa18.34■□□□□ 0.53
PTCD3-210ENST00000473829 TEX51A0A1B0GUA7 166 aa18.33■□□□□ 0.52
PTCD3-210ENST00000473829 PIPSLA2A3N6 862 aa18.33■□□□□ 0.52
PTCD3-210ENST00000473829 SLC9B1P1A6NJY1 282 aa18.33■□□□□ 0.52
PTCD3-210ENST00000473829 C2orf74A8MZ97 194 aa18.33■□□□□ 0.52
PTCD3-210ENST00000473829 EFSO43281 561 aa18.33■□□□□ 0.52
PTCD3-210ENST00000473829 STK17BO94768 372 aa18.33■□□□□ 0.52
PTCD3-210ENST00000473829 TIAF1O95411 115 aa18.33■□□□□ 0.52
PTCD3-210ENST00000473829 ZBTB11O95625 1053 aaPredicted RBP18.33■□□□□ 0.52
PTCD3-210ENST00000473829 ST6GAL1P15907 406 aa18.33■□□□□ 0.52
PTCD3-210ENST00000473829 UGT2B7P16662 529 aa18.33■□□□□ 0.52
PTCD3-210ENST00000473829 ATP5DP30049 168 aa18.33■□□□□ 0.52
PTCD3-210ENST00000473829 CARSP49589 748 aaKnown RBP18.33■□□□□ 0.52
PTCD3-210ENST00000473829 CKAP4Q07065 602 aaKnown RBP18.33■□□□□ 0.52
PTCD3-210ENST00000473829 TUBB3Q13509 450 aa18.33■□□□□ 0.52
PTCD3-210ENST00000473829 CUL1Q13616 776 aa18.33■□□□□ 0.52
PTCD3-210ENST00000473829 TRADDQ15628 312 aa18.33■□□□□ 0.52
PTCD3-210ENST00000473829 KYNUQ16719 465 aa18.33■□□□□ 0.52
PTCD3-210ENST00000473829 TEDDM1Q5T9Z0 273 aa18.33■□□□□ 0.52
PTCD3-210ENST00000473829 BROXQ5VW32 411 aa18.33■□□□□ 0.52
PTCD3-210ENST00000473829 TIPARPQ7Z3E1 657 aaKnown RBP18.33■□□□□ 0.52
PTCD3-210ENST00000473829 CARFQ8N187 725 aa18.33■□□□□ 0.52
PTCD3-210ENST00000473829 GSDMBQ8TAX9 411 aa18.33■□□□□ 0.52
PTCD3-210ENST00000473829 SKA2Q8WVK7 121 aaPredicted RBP18.33■□□□□ 0.52
PTCD3-210ENST00000473829 KCNJ9Q92806 393 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms